Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.62
SND1-IT1Q9HBX3 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
SND1-IT1Q9HBX3 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
SND1-IT1Q9HBX3 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
SND1-IT1Q9HBX3 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC11.21□□□□□ -0.62
SND1-IT1Q9HBX3 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.62
SND1-IT1Q9HBX3 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SND1-IT1Q9HBX3 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SND1-IT1Q9HBX3 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
SND1-IT1Q9HBX3 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SND1-IT1Q9HBX3 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 AC099063.4-201ENST00000641099 1602 ntBASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 COPE-203ENST00000351079 907 ntTSL 2 BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 AC122714.2-201ENST00000502787 707 ntBASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 AL390719.2-201ENST00000606993 987 ntBASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SND1-IT1Q9HBX3 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SND1-IT1Q9HBX3 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC11.19□□□□□ -0.62
SND1-IT1Q9HBX3 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SND1-IT1Q9HBX3 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SND1-IT1Q9HBX3 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SND1-IT1Q9HBX3 GCK-202ENST00000345378 2421 ntTSL 2 BASIC11.19□□□□□ -0.62
SND1-IT1Q9HBX3 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SND1-IT1Q9HBX3 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SND1-IT1Q9HBX3 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SND1-IT1Q9HBX3 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SND1-IT1Q9HBX3 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC11.19□□□□□ -0.62
SND1-IT1Q9HBX3 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SND1-IT1Q9HBX3 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SND1-IT1Q9HBX3 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SND1-IT1Q9HBX3 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SND1-IT1Q9HBX3 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC11.19□□□□□ -0.62
SND1-IT1Q9HBX3 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SND1-IT1Q9HBX3 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
SND1-IT1Q9HBX3 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
SND1-IT1Q9HBX3 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SND1-IT1Q9HBX3 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms