Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP29Q9HBJ7 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
USP29Q9HBJ7 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
USP29Q9HBJ7 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.15■□□□□ 0.34
USP29Q9HBJ7 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.15■□□□□ 0.34
USP29Q9HBJ7 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.15■□□□□ 0.34
USP29Q9HBJ7 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.15■□□□□ 0.34
USP29Q9HBJ7 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.15■□□□□ 0.34
USP29Q9HBJ7 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.15■□□□□ 0.34
USP29Q9HBJ7 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.15■□□□□ 0.34
USP29Q9HBJ7 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.15■□□□□ 0.34
USP29Q9HBJ7 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.15■□□□□ 0.34
USP29Q9HBJ7 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.15■□□□□ 0.34
USP29Q9HBJ7 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.15■□□□□ 0.34
USP29Q9HBJ7 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP29Q9HBJ7 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.15■□□□□ 0.34
USP29Q9HBJ7 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP29Q9HBJ7 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
USP29Q9HBJ7 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP29Q9HBJ7 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
USP29Q9HBJ7 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP29Q9HBJ7 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP29Q9HBJ7 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.15■□□□□ 0.34
USP29Q9HBJ7 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.15■□□□□ 0.34
USP29Q9HBJ7 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP29Q9HBJ7 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
USP29Q9HBJ7 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.15■□□□□ 0.34
USP29Q9HBJ7 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
USP29Q9HBJ7 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
USP29Q9HBJ7 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
USP29Q9HBJ7 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.14■□□□□ 0.33
USP29Q9HBJ7 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
USP29Q9HBJ7 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP29Q9HBJ7 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
USP29Q9HBJ7 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP29Q9HBJ7 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
USP29Q9HBJ7 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
USP29Q9HBJ7 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.14■□□□□ 0.33
USP29Q9HBJ7 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.14■□□□□ 0.33
USP29Q9HBJ7 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP29Q9HBJ7 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
USP29Q9HBJ7 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.14■□□□□ 0.33
USP29Q9HBJ7 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
USP29Q9HBJ7 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.14■□□□□ 0.33
USP29Q9HBJ7 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.14■□□□□ 0.33
USP29Q9HBJ7 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.14■□□□□ 0.33
USP29Q9HBJ7 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.14■□□□□ 0.33
USP29Q9HBJ7 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.14■□□□□ 0.33
USP29Q9HBJ7 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.14■□□□□ 0.33
USP29Q9HBJ7 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.14■□□□□ 0.33
USP29Q9HBJ7 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
USP29Q9HBJ7 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
USP29Q9HBJ7 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP29Q9HBJ7 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.14■□□□□ 0.33
USP29Q9HBJ7 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
USP29Q9HBJ7 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
USP29Q9HBJ7 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
USP29Q9HBJ7 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP29Q9HBJ7 AC103702.1-201ENST00000548801 2630 ntBASIC17.14■□□□□ 0.33
USP29Q9HBJ7 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP29Q9HBJ7 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP29Q9HBJ7 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
USP29Q9HBJ7 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP29Q9HBJ7 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
USP29Q9HBJ7 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP29Q9HBJ7 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USP29Q9HBJ7 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP29Q9HBJ7 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.13■□□□□ 0.33
USP29Q9HBJ7 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP29Q9HBJ7 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.13■□□□□ 0.33
USP29Q9HBJ7 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP29Q9HBJ7 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.13■□□□□ 0.33
USP29Q9HBJ7 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USP29Q9HBJ7 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USP29Q9HBJ7 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP29Q9HBJ7 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP29Q9HBJ7 AC004967.1-201ENST00000453589 447 ntBASIC17.13■□□□□ 0.33
USP29Q9HBJ7 AC108751.1-201ENST00000490852 363 ntBASIC17.13■□□□□ 0.33
USP29Q9HBJ7 AC112482.1-201ENST00000492080 688 ntBASIC17.13■□□□□ 0.33
USP29Q9HBJ7 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.13■□□□□ 0.33
USP29Q9HBJ7 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
USP29Q9HBJ7 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.13■□□□□ 0.33
USP29Q9HBJ7 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.13■□□□□ 0.33
USP29Q9HBJ7 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.13■□□□□ 0.33
USP29Q9HBJ7 AC005412.3-201ENST00000580309 715 ntBASIC17.13■□□□□ 0.33
USP29Q9HBJ7 AP001160.2-201ENST00000596071 487 ntBASIC17.13■□□□□ 0.33
USP29Q9HBJ7 AC055717.3-201ENST00000622967 595 ntBASIC17.13■□□□□ 0.33
USP29Q9HBJ7 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.13■□□□□ 0.33
USP29Q9HBJ7 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP29Q9HBJ7 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP29Q9HBJ7 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.13■□□□□ 0.33
USP29Q9HBJ7 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP29Q9HBJ7 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP29Q9HBJ7 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
USP29Q9HBJ7 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
USP29Q9HBJ7 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USP29Q9HBJ7 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP29Q9HBJ7 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP29Q9HBJ7 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.13■□□□□ 0.33
USP29Q9HBJ7 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms