Protein–RNA interactions for Protein: Q9H0K1

SIK2, Serine/threonine-protein kinase SIK2, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIK2Q9H0K1 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SIK2Q9H0K1 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.27■□□□□ 0.36
SIK2Q9H0K1 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.27■□□□□ 0.36
SIK2Q9H0K1 HLA-A-202ENST00000376806 1854 ntBASIC17.27■□□□□ 0.36
SIK2Q9H0K1 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.27■□□□□ 0.36
SIK2Q9H0K1 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.27■□□□□ 0.36
SIK2Q9H0K1 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SIK2Q9H0K1 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.27■□□□□ 0.36
SIK2Q9H0K1 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SIK2Q9H0K1 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
SIK2Q9H0K1 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SIK2Q9H0K1 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.27■□□□□ 0.36
SIK2Q9H0K1 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SIK2Q9H0K1 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SIK2Q9H0K1 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SIK2Q9H0K1 AC002056.1-201ENST00000395613 760 ntBASIC17.27■□□□□ 0.36
SIK2Q9H0K1 RPSAP43-201ENST00000402237 625 ntBASIC17.27■□□□□ 0.36
SIK2Q9H0K1 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.27■□□□□ 0.36
SIK2Q9H0K1 GPX1P2-201ENST00000429271 606 ntBASIC17.27■□□□□ 0.36
SIK2Q9H0K1 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SIK2Q9H0K1 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.27■□□□□ 0.36
SIK2Q9H0K1 AL139011.1-202ENST00000642063 584 ntBASIC17.27■□□□□ 0.36
SIK2Q9H0K1 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.27■□□□□ 0.36
SIK2Q9H0K1 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.27■□□□□ 0.36
SIK2Q9H0K1 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SIK2Q9H0K1 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SIK2Q9H0K1 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
SIK2Q9H0K1 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
SIK2Q9H0K1 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SIK2Q9H0K1 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SIK2Q9H0K1 AL512652.2-201ENST00000625156 1716 ntBASIC17.27■□□□□ 0.35
SIK2Q9H0K1 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
SIK2Q9H0K1 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.27■□□□□ 0.35
SIK2Q9H0K1 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SIK2Q9H0K1 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SIK2Q9H0K1 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
SIK2Q9H0K1 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.26■□□□□ 0.35
SIK2Q9H0K1 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SIK2Q9H0K1 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SIK2Q9H0K1 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SIK2Q9H0K1 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.26■□□□□ 0.35
SIK2Q9H0K1 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SIK2Q9H0K1 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SIK2Q9H0K1 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SIK2Q9H0K1 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
SIK2Q9H0K1 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SIK2Q9H0K1 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SIK2Q9H0K1 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SIK2Q9H0K1 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SIK2Q9H0K1 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SIK2Q9H0K1 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.26■□□□□ 0.35
SIK2Q9H0K1 PMS2P4-201ENST00000412466 1052 ntBASIC17.26■□□□□ 0.35
SIK2Q9H0K1 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.26■□□□□ 0.35
SIK2Q9H0K1 HTR5BP-201ENST00000430851 1154 ntBASIC17.26■□□□□ 0.35
SIK2Q9H0K1 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SIK2Q9H0K1 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SIK2Q9H0K1 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SIK2Q9H0K1 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SIK2Q9H0K1 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.26■□□□□ 0.35
SIK2Q9H0K1 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.26■□□□□ 0.35
SIK2Q9H0K1 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.26■□□□□ 0.35
SIK2Q9H0K1 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SIK2Q9H0K1 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SIK2Q9H0K1 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
SIK2Q9H0K1 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SIK2Q9H0K1 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SIK2Q9H0K1 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.26■□□□□ 0.35
SIK2Q9H0K1 AC006538.1-201ENST00000567905 1585 ntBASIC17.26■□□□□ 0.35
SIK2Q9H0K1 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.26■□□□□ 0.35
SIK2Q9H0K1 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SIK2Q9H0K1 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SIK2Q9H0K1 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SIK2Q9H0K1 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SIK2Q9H0K1 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SIK2Q9H0K1 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SIK2Q9H0K1 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SIK2Q9H0K1 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
SIK2Q9H0K1 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.25■□□□□ 0.35
SIK2Q9H0K1 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SIK2Q9H0K1 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SIK2Q9H0K1 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SIK2Q9H0K1 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SIK2Q9H0K1 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SIK2Q9H0K1 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SIK2Q9H0K1 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SIK2Q9H0K1 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
SIK2Q9H0K1 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SIK2Q9H0K1 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.25■□□□□ 0.35
SIK2Q9H0K1 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SIK2Q9H0K1 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.25■□□□□ 0.35
SIK2Q9H0K1 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SIK2Q9H0K1 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SIK2Q9H0K1 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.25■□□□□ 0.35
SIK2Q9H0K1 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.25■□□□□ 0.35
SIK2Q9H0K1 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.25■□□□□ 0.35
SIK2Q9H0K1 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.25■□□□□ 0.35
SIK2Q9H0K1 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.25■□□□□ 0.35
SIK2Q9H0K1 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.25■□□□□ 0.35
SIK2Q9H0K1 AC092902.6-201ENST00000641783 218 ntBASIC17.25■□□□□ 0.35
SIK2Q9H0K1 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms