Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.89■□□□□ 0.77
UPF3BQ9BZI7 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.77
UPF3BQ9BZI7 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC19.89■□□□□ 0.77
UPF3BQ9BZI7 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC19.89■□□□□ 0.77
UPF3BQ9BZI7 AC091167.2-201ENST00000579581 588 ntBASIC19.89■□□□□ 0.77
UPF3BQ9BZI7 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.89■□□□□ 0.77
UPF3BQ9BZI7 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.89■□□□□ 0.77
UPF3BQ9BZI7 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.89■□□□□ 0.77
UPF3BQ9BZI7 CYP2A7P1-201ENST00000595391 815 ntBASIC19.89■□□□□ 0.77
UPF3BQ9BZI7 AL121912.1-201ENST00000603683 238 ntBASIC19.89■□□□□ 0.77
UPF3BQ9BZI7 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19.89■□□□□ 0.77
UPF3BQ9BZI7 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.89■□□□□ 0.77
UPF3BQ9BZI7 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC19.89■□□□□ 0.77
UPF3BQ9BZI7 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.89■□□□□ 0.77
UPF3BQ9BZI7 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
UPF3BQ9BZI7 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
UPF3BQ9BZI7 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UPF3BQ9BZI7 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UPF3BQ9BZI7 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC19.89■□□□□ 0.77
UPF3BQ9BZI7 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
UPF3BQ9BZI7 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC19.88■□□□□ 0.77
UPF3BQ9BZI7 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UPF3BQ9BZI7 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
UPF3BQ9BZI7 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UPF3BQ9BZI7 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UPF3BQ9BZI7 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UPF3BQ9BZI7 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UPF3BQ9BZI7 KRT8P39-201ENST00000396270 1433 ntBASIC19.88■□□□□ 0.77
UPF3BQ9BZI7 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UPF3BQ9BZI7 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.88■□□□□ 0.77
UPF3BQ9BZI7 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.88■□□□□ 0.77
UPF3BQ9BZI7 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.88■□□□□ 0.77
UPF3BQ9BZI7 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.88■□□□□ 0.77
UPF3BQ9BZI7 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.88■□□□□ 0.77
UPF3BQ9BZI7 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.88■□□□□ 0.77
UPF3BQ9BZI7 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.88■□□□□ 0.77
UPF3BQ9BZI7 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.88■□□□□ 0.77
UPF3BQ9BZI7 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.88■□□□□ 0.77
UPF3BQ9BZI7 AL356488.2-201ENST00000602755 427 ntBASIC19.88■□□□□ 0.77
UPF3BQ9BZI7 AC008667.4-201ENST00000607370 168 ntBASIC19.88■□□□□ 0.77
UPF3BQ9BZI7 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.88■□□□□ 0.77
UPF3BQ9BZI7 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UPF3BQ9BZI7 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UPF3BQ9BZI7 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC19.88■□□□□ 0.77
UPF3BQ9BZI7 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC19.88■□□□□ 0.77
UPF3BQ9BZI7 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
UPF3BQ9BZI7 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UPF3BQ9BZI7 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC19.88■□□□□ 0.77
UPF3BQ9BZI7 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC19.88■□□□□ 0.77
UPF3BQ9BZI7 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
UPF3BQ9BZI7 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC19.88■□□□□ 0.77
UPF3BQ9BZI7 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC19.88■□□□□ 0.77
UPF3BQ9BZI7 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC19.88■□□□□ 0.77
UPF3BQ9BZI7 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC19.87■□□□□ 0.77
UPF3BQ9BZI7 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC19.87■□□□□ 0.77
UPF3BQ9BZI7 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC19.87■□□□□ 0.77
UPF3BQ9BZI7 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UPF3BQ9BZI7 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.87■□□□□ 0.77
UPF3BQ9BZI7 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC19.87■□□□□ 0.77
UPF3BQ9BZI7 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.87■□□□□ 0.77
UPF3BQ9BZI7 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC19.87■□□□□ 0.77
UPF3BQ9BZI7 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UPF3BQ9BZI7 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UPF3BQ9BZI7 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UPF3BQ9BZI7 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
UPF3BQ9BZI7 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.87■□□□□ 0.77
UPF3BQ9BZI7 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.87■□□□□ 0.77
UPF3BQ9BZI7 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UPF3BQ9BZI7 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.87■□□□□ 0.77
UPF3BQ9BZI7 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC19.87■□□□□ 0.77
UPF3BQ9BZI7 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
UPF3BQ9BZI7 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC19.87■□□□□ 0.77
UPF3BQ9BZI7 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC19.87■□□□□ 0.77
UPF3BQ9BZI7 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
UPF3BQ9BZI7 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.87■□□□□ 0.77
UPF3BQ9BZI7 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
UPF3BQ9BZI7 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
UPF3BQ9BZI7 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UPF3BQ9BZI7 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
UPF3BQ9BZI7 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UPF3BQ9BZI7 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UPF3BQ9BZI7 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.86■□□□□ 0.77
UPF3BQ9BZI7 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
UPF3BQ9BZI7 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
UPF3BQ9BZI7 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC19.86■□□□□ 0.77
UPF3BQ9BZI7 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
UPF3BQ9BZI7 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UPF3BQ9BZI7 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC19.86■□□□□ 0.77
UPF3BQ9BZI7 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
UPF3BQ9BZI7 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
UPF3BQ9BZI7 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UPF3BQ9BZI7 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.86■□□□□ 0.77
UPF3BQ9BZI7 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
UPF3BQ9BZI7 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
UPF3BQ9BZI7 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
UPF3BQ9BZI7 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.86■□□□□ 0.77
UPF3BQ9BZI7 IGHV3-65-201ENST00000523210 341 ntBASIC19.86■□□□□ 0.77
UPF3BQ9BZI7 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.86■□□□□ 0.77
UPF3BQ9BZI7 OR7E47P-204ENST00000575924 449 ntBASIC19.86■□□□□ 0.77
UPF3BQ9BZI7 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms