Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SSBP4Q9BWG4 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SSBP4Q9BWG4 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SSBP4Q9BWG4 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SSBP4Q9BWG4 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC12.65□□□□□ -0.38
SSBP4Q9BWG4 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SSBP4Q9BWG4 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
SSBP4Q9BWG4 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SSBP4Q9BWG4 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC12.65□□□□□ -0.38
SSBP4Q9BWG4 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
SSBP4Q9BWG4 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SSBP4Q9BWG4 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
SSBP4Q9BWG4 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
SSBP4Q9BWG4 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
SSBP4Q9BWG4 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SSBP4Q9BWG4 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC12.65□□□□□ -0.38
SSBP4Q9BWG4 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SSBP4Q9BWG4 ME2P1-201ENST00000426028 1970 ntBASIC12.65□□□□□ -0.38
SSBP4Q9BWG4 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
SSBP4Q9BWG4 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SSBP4Q9BWG4 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
SSBP4Q9BWG4 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
SSBP4Q9BWG4 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
SSBP4Q9BWG4 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC12.65□□□□□ -0.39
SSBP4Q9BWG4 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
SSBP4Q9BWG4 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 FAM8A6P-201ENST00000407496 1135 ntBASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 SAPCD2P2-201ENST00000431719 1174 ntBASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 AP003733.1-201ENST00000491725 852 ntBASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 CLN6-221ENST00000637494 765 ntTSL 5 BASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 AL031432.5-201ENST00000641059 760 ntBASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 PRAL-201ENST00000624952 3286 ntBASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC12.64□□□□□ -0.39
SSBP4Q9BWG4 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP4Q9BWG4 AL596087.1-201ENST00000400979 1969 ntBASIC12.63□□□□□ -0.39
SSBP4Q9BWG4 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
SSBP4Q9BWG4 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP4Q9BWG4 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC12.63□□□□□ -0.39
SSBP4Q9BWG4 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP4Q9BWG4 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP4Q9BWG4 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC12.63□□□□□ -0.39
SSBP4Q9BWG4 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP4Q9BWG4 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP4Q9BWG4 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC12.63□□□□□ -0.39
SSBP4Q9BWG4 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP4Q9BWG4 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms