Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.03■□□□□ 0.32
TRIM56Q9BRZ2 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM56Q9BRZ2 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM56Q9BRZ2 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TRIM56Q9BRZ2 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.03■□□□□ 0.32
TRIM56Q9BRZ2 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM56Q9BRZ2 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.03■□□□□ 0.32
TRIM56Q9BRZ2 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TRIM56Q9BRZ2 AF238378.1-201ENST00000526806 358 ntBASIC17.03■□□□□ 0.32
TRIM56Q9BRZ2 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.03■□□□□ 0.32
TRIM56Q9BRZ2 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.03■□□□□ 0.32
TRIM56Q9BRZ2 AC025062.2-201ENST00000605477 670 ntBASIC17.03■□□□□ 0.32
TRIM56Q9BRZ2 REXO1L6P-202ENST00000619970 1078 ntBASIC17.03■□□□□ 0.32
TRIM56Q9BRZ2 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM56Q9BRZ2 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM56Q9BRZ2 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
TRIM56Q9BRZ2 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM56Q9BRZ2 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
TRIM56Q9BRZ2 AC063926.3-201ENST00000624734 5658 ntBASIC17.03■□□□□ 0.32
TRIM56Q9BRZ2 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
TRIM56Q9BRZ2 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM56Q9BRZ2 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM56Q9BRZ2 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC17.03■□□□□ 0.32
TRIM56Q9BRZ2 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM56Q9BRZ2 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM56Q9BRZ2 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM56Q9BRZ2 AC006277.1-201ENST00000624348 1610 ntBASIC17.03■□□□□ 0.32
TRIM56Q9BRZ2 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM56Q9BRZ2 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.03■□□□□ 0.32
TRIM56Q9BRZ2 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM56Q9BRZ2 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM56Q9BRZ2 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM56Q9BRZ2 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.02■□□□□ 0.32
TRIM56Q9BRZ2 AC006504.4-201ENST00000592118 1568 ntBASIC17.02■□□□□ 0.32
TRIM56Q9BRZ2 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM56Q9BRZ2 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM56Q9BRZ2 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM56Q9BRZ2 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
TRIM56Q9BRZ2 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.02■□□□□ 0.32
TRIM56Q9BRZ2 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM56Q9BRZ2 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM56Q9BRZ2 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM56Q9BRZ2 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM56Q9BRZ2 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM56Q9BRZ2 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM56Q9BRZ2 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM56Q9BRZ2 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM56Q9BRZ2 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.02■□□□□ 0.32
TRIM56Q9BRZ2 PTCHD3P3-201ENST00000403073 906 ntBASIC17.02■□□□□ 0.32
TRIM56Q9BRZ2 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.02■□□□□ 0.32
TRIM56Q9BRZ2 ELK2BP-201ENST00000415014 1224 ntBASIC17.02■□□□□ 0.32
TRIM56Q9BRZ2 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM56Q9BRZ2 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.02■□□□□ 0.32
TRIM56Q9BRZ2 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.02■□□□□ 0.32
TRIM56Q9BRZ2 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.02■□□□□ 0.32
TRIM56Q9BRZ2 AC091304.2-201ENST00000564639 760 ntBASIC17.02■□□□□ 0.32
TRIM56Q9BRZ2 PRELID1P1-202ENST00000567272 903 ntBASIC17.02■□□□□ 0.32
TRIM56Q9BRZ2 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.02■□□□□ 0.32
TRIM56Q9BRZ2 AL121772.3-201ENST00000610840 674 ntBASIC17.02■□□□□ 0.32
TRIM56Q9BRZ2 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM56Q9BRZ2 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM56Q9BRZ2 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.02■□□□□ 0.31
TRIM56Q9BRZ2 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM56Q9BRZ2 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM56Q9BRZ2 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM56Q9BRZ2 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM56Q9BRZ2 CYP2T1P-202ENST00000641596 2535 ntBASIC17.02■□□□□ 0.31
TRIM56Q9BRZ2 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
TRIM56Q9BRZ2 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.02■□□□□ 0.31
TRIM56Q9BRZ2 AC006538.1-201ENST00000567905 1585 ntBASIC17.02■□□□□ 0.31
TRIM56Q9BRZ2 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM56Q9BRZ2 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
TRIM56Q9BRZ2 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
TRIM56Q9BRZ2 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM56Q9BRZ2 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.01■□□□□ 0.31
TRIM56Q9BRZ2 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM56Q9BRZ2 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM56Q9BRZ2 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.01■□□□□ 0.31
TRIM56Q9BRZ2 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.01■□□□□ 0.31
TRIM56Q9BRZ2 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.01■□□□□ 0.31
TRIM56Q9BRZ2 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.01■□□□□ 0.31
TRIM56Q9BRZ2 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM56Q9BRZ2 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM56Q9BRZ2 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.01■□□□□ 0.31
TRIM56Q9BRZ2 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
TRIM56Q9BRZ2 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.01■□□□□ 0.31
TRIM56Q9BRZ2 PAWRP1-201ENST00000451083 565 ntBASIC17.01■□□□□ 0.31
TRIM56Q9BRZ2 AP002490.2-201ENST00000524791 560 ntBASIC17.01■□□□□ 0.31
TRIM56Q9BRZ2 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
TRIM56Q9BRZ2 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.01■□□□□ 0.31
TRIM56Q9BRZ2 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.01■□□□□ 0.31
TRIM56Q9BRZ2 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.01■□□□□ 0.31
TRIM56Q9BRZ2 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.01■□□□□ 0.31
TRIM56Q9BRZ2 AC021087.4-201ENST00000563761 564 ntBASIC17.01■□□□□ 0.31
TRIM56Q9BRZ2 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.01■□□□□ 0.31
TRIM56Q9BRZ2 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
TRIM56Q9BRZ2 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.01■□□□□ 0.31
TRIM56Q9BRZ2 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.01■□□□□ 0.31
TRIM56Q9BRZ2 AL589182.2-201ENST00000619332 1049 ntBASIC17.01■□□□□ 0.31
TRIM56Q9BRZ2 AC004706.3-202ENST00000621574 984 ntBASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms