Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PTP4A1Q93096 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PTP4A1Q93096 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PTP4A1Q93096 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PTP4A1Q93096 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
PTP4A1Q93096 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
PTP4A1Q93096 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.99□□□□□ -0.01
PTP4A1Q93096 AL589182.2-201ENST00000619332 1049 ntBASIC14.99□□□□□ -0.01
PTP4A1Q93096 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.99□□□□□ -0.01
PTP4A1Q93096 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.99□□□□□ -0.01
PTP4A1Q93096 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PTP4A1Q93096 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PTP4A1Q93096 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PTP4A1Q93096 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.99□□□□□ -0.01
PTP4A1Q93096 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PTP4A1Q93096 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PTP4A1Q93096 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PTP4A1Q93096 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
PTP4A1Q93096 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PTP4A1Q93096 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.99□□□□□ -0.01
PTP4A1Q93096 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PTP4A1Q93096 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PTP4A1Q93096 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PTP4A1Q93096 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PTP4A1Q93096 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
PTP4A1Q93096 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PTP4A1Q93096 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.98□□□□□ -0.01
PTP4A1Q93096 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PTP4A1Q93096 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
PTP4A1Q93096 AC010491.1-201ENST00000563101 2797 ntBASIC14.98□□□□□ -0.01
PTP4A1Q93096 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PTP4A1Q93096 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.98□□□□□ -0.01
PTP4A1Q93096 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PTP4A1Q93096 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
PTP4A1Q93096 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PTP4A1Q93096 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PTP4A1Q93096 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.98□□□□□ -0.01
PTP4A1Q93096 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PTP4A1Q93096 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PTP4A1Q93096 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PTP4A1Q93096 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PTP4A1Q93096 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC14.98□□□□□ -0.01
PTP4A1Q93096 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.98□□□□□ -0.01
PTP4A1Q93096 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.98□□□□□ -0.01
PTP4A1Q93096 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
PTP4A1Q93096 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.98□□□□□ -0.01
PTP4A1Q93096 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.98□□□□□ -0.01
PTP4A1Q93096 MTDHP3-201ENST00000594186 672 ntBASIC14.98□□□□□ -0.01
PTP4A1Q93096 AL139424.1-201ENST00000607572 797 ntBASIC14.98□□□□□ -0.01
PTP4A1Q93096 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
PTP4A1Q93096 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC14.98□□□□□ -0.01
PTP4A1Q93096 REXO1L3P-201ENST00000622202 1288 ntBASIC14.98□□□□□ -0.01
PTP4A1Q93096 AC012313.10-201ENST00000623509 926 ntBASIC14.98□□□□□ -0.01
PTP4A1Q93096 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.98□□□□□ -0.01
PTP4A1Q93096 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PTP4A1Q93096 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.98□□□□□ -0.01
PTP4A1Q93096 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PTP4A1Q93096 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.98□□□□□ -0.01
PTP4A1Q93096 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
PTP4A1Q93096 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PTP4A1Q93096 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PTP4A1Q93096 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.98□□□□□ -0.01
PTP4A1Q93096 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PTP4A1Q93096 AC002310.6-201ENST00000624451 1377 ntBASIC14.98□□□□□ -0.01
PTP4A1Q93096 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
PTP4A1Q93096 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
PTP4A1Q93096 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PTP4A1Q93096 LINC02228-204ENST00000642115 2962 ntBASIC14.97□□□□□ -0.01
PTP4A1Q93096 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
PTP4A1Q93096 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PTP4A1Q93096 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.97□□□□□ -0.01
PTP4A1Q93096 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PTP4A1Q93096 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PTP4A1Q93096 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PTP4A1Q93096 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.97□□□□□ -0.01
PTP4A1Q93096 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PTP4A1Q93096 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PTP4A1Q93096 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.97□□□□□ -0.01
PTP4A1Q93096 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PTP4A1Q93096 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PTP4A1Q93096 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PTP4A1Q93096 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
PTP4A1Q93096 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
PTP4A1Q93096 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PTP4A1Q93096 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
PTP4A1Q93096 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.97□□□□□ -0.01
PTP4A1Q93096 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.97□□□□□ -0.01
PTP4A1Q93096 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PTP4A1Q93096 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.97□□□□□ -0.01
PTP4A1Q93096 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.97□□□□□ -0.01
PTP4A1Q93096 REXO1L6P-202ENST00000619970 1078 ntBASIC14.97□□□□□ -0.01
PTP4A1Q93096 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PTP4A1Q93096 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PTP4A1Q93096 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.97□□□□□ -0.01
PTP4A1Q93096 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PTP4A1Q93096 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PTP4A1Q93096 AC006449.6-201ENST00000612330 2296 ntBASIC14.97□□□□□ -0.01
PTP4A1Q93096 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
PTP4A1Q93096 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PTP4A1Q93096 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms