Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NUP35Q8NFH5 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NUP35Q8NFH5 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NUP35Q8NFH5 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC12.48□□□□□ -0.41
NUP35Q8NFH5 AC103564.2-201ENST00000432853 1299 ntBASIC12.48□□□□□ -0.41
NUP35Q8NFH5 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC12.48□□□□□ -0.41
NUP35Q8NFH5 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC12.48□□□□□ -0.41
NUP35Q8NFH5 AP003733.1-201ENST00000491725 852 ntBASIC12.48□□□□□ -0.41
NUP35Q8NFH5 PENK-204ENST00000518770 863 ntTSL 2 BASIC12.48□□□□□ -0.41
NUP35Q8NFH5 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC12.48□□□□□ -0.41
NUP35Q8NFH5 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC12.48□□□□□ -0.41
NUP35Q8NFH5 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NUP35Q8NFH5 AL136038.4-201ENST00000603606 1261 ntBASIC12.48□□□□□ -0.41
NUP35Q8NFH5 MMD2-204ENST00000612910 778 ntTSL 5 BASIC12.48□□□□□ -0.41
NUP35Q8NFH5 AC026471.5-201ENST00000615068 467 ntBASIC12.48□□□□□ -0.41
NUP35Q8NFH5 AC113410.3-201ENST00000623366 203 ntBASIC12.48□□□□□ -0.41
NUP35Q8NFH5 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NUP35Q8NFH5 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC12.48□□□□□ -0.41
NUP35Q8NFH5 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NUP35Q8NFH5 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NUP35Q8NFH5 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
NUP35Q8NFH5 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
NUP35Q8NFH5 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
NUP35Q8NFH5 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NUP35Q8NFH5 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
NUP35Q8NFH5 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
NUP35Q8NFH5 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
NUP35Q8NFH5 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC12.48□□□□□ -0.41
NUP35Q8NFH5 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
NUP35Q8NFH5 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NUP35Q8NFH5 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC12.48□□□□□ -0.41
NUP35Q8NFH5 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NUP35Q8NFH5 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
NUP35Q8NFH5 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NUP35Q8NFH5 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC12.47□□□□□ -0.41
NUP35Q8NFH5 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NUP35Q8NFH5 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NUP35Q8NFH5 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC12.47□□□□□ -0.41
NUP35Q8NFH5 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NUP35Q8NFH5 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NUP35Q8NFH5 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC12.47□□□□□ -0.41
NUP35Q8NFH5 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC12.47□□□□□ -0.41
NUP35Q8NFH5 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NUP35Q8NFH5 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC12.47□□□□□ -0.41
NUP35Q8NFH5 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
NUP35Q8NFH5 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC12.47□□□□□ -0.41
NUP35Q8NFH5 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NUP35Q8NFH5 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NUP35Q8NFH5 AL353692.3-201ENST00000407031 1396 ntBASIC12.47□□□□□ -0.41
NUP35Q8NFH5 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
NUP35Q8NFH5 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NUP35Q8NFH5 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NUP35Q8NFH5 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NUP35Q8NFH5 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NUP35Q8NFH5 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
NUP35Q8NFH5 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
NUP35Q8NFH5 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
NUP35Q8NFH5 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC12.47□□□□□ -0.41
NUP35Q8NFH5 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NUP35Q8NFH5 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NUP35Q8NFH5 AP000523.1-201ENST00000398242 1049 ntBASIC12.47□□□□□ -0.41
NUP35Q8NFH5 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
NUP35Q8NFH5 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC12.47□□□□□ -0.41
NUP35Q8NFH5 AC122714.2-201ENST00000502787 707 ntBASIC12.47□□□□□ -0.41
NUP35Q8NFH5 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NUP35Q8NFH5 STK19B-204ENST00000512515 211 ntBASIC12.47□□□□□ -0.41
NUP35Q8NFH5 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC12.47□□□□□ -0.41
NUP35Q8NFH5 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC12.47□□□□□ -0.41
NUP35Q8NFH5 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC12.47□□□□□ -0.41
NUP35Q8NFH5 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
NUP35Q8NFH5 AP001412.1-201ENST00000608405 714 ntBASIC12.47□□□□□ -0.41
NUP35Q8NFH5 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NUP35Q8NFH5 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NUP35Q8NFH5 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC12.47□□□□□ -0.41
NUP35Q8NFH5 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
NUP35Q8NFH5 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NUP35Q8NFH5 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC12.47□□□□□ -0.41
NUP35Q8NFH5 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NUP35Q8NFH5 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
NUP35Q8NFH5 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NUP35Q8NFH5 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
NUP35Q8NFH5 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NUP35Q8NFH5 AC006277.1-201ENST00000624348 1610 ntBASIC12.47□□□□□ -0.41
NUP35Q8NFH5 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NUP35Q8NFH5 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
NUP35Q8NFH5 TCAF2P1-201ENST00000291129 2421 ntBASIC12.47□□□□□ -0.41
NUP35Q8NFH5 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NUP35Q8NFH5 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC12.47□□□□□ -0.41
NUP35Q8NFH5 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NUP35Q8NFH5 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NUP35Q8NFH5 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NUP35Q8NFH5 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
NUP35Q8NFH5 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NUP35Q8NFH5 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
NUP35Q8NFH5 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
NUP35Q8NFH5 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NUP35Q8NFH5 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
NUP35Q8NFH5 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
NUP35Q8NFH5 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NUP35Q8NFH5 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms