Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC17.68■□□□□ 0.42
NPAS4Q8IUM7 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.68■□□□□ 0.42
NPAS4Q8IUM7 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NPAS4Q8IUM7 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.68■□□□□ 0.42
NPAS4Q8IUM7 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.68■□□□□ 0.42
NPAS4Q8IUM7 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NPAS4Q8IUM7 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
NPAS4Q8IUM7 AL512652.2-201ENST00000625156 1716 ntBASIC17.68■□□□□ 0.42
NPAS4Q8IUM7 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC17.68■□□□□ 0.42
NPAS4Q8IUM7 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.68■□□□□ 0.42
NPAS4Q8IUM7 AC090340.1-201ENST00000620778 4980 ntBASIC17.68■□□□□ 0.42
NPAS4Q8IUM7 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.68■□□□□ 0.42
NPAS4Q8IUM7 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPAS4Q8IUM7 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.68■□□□□ 0.42
NPAS4Q8IUM7 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
NPAS4Q8IUM7 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.68■□□□□ 0.42
NPAS4Q8IUM7 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPAS4Q8IUM7 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPAS4Q8IUM7 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.68■□□□□ 0.42
NPAS4Q8IUM7 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPAS4Q8IUM7 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.68■□□□□ 0.42
NPAS4Q8IUM7 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NPAS4Q8IUM7 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPAS4Q8IUM7 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPAS4Q8IUM7 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPAS4Q8IUM7 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.68■□□□□ 0.42
NPAS4Q8IUM7 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.67■□□□□ 0.42
NPAS4Q8IUM7 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC17.67■□□□□ 0.42
NPAS4Q8IUM7 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPAS4Q8IUM7 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NPAS4Q8IUM7 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPAS4Q8IUM7 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
NPAS4Q8IUM7 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPAS4Q8IUM7 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
NPAS4Q8IUM7 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPAS4Q8IUM7 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NPAS4Q8IUM7 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NPAS4Q8IUM7 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPAS4Q8IUM7 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPAS4Q8IUM7 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC17.67■□□□□ 0.42
NPAS4Q8IUM7 SPDYE17-201ENST00000412399 783 ntBASIC17.67■□□□□ 0.42
NPAS4Q8IUM7 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NPAS4Q8IUM7 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
NPAS4Q8IUM7 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.67■□□□□ 0.42
NPAS4Q8IUM7 GIMAP3P-201ENST00000495150 836 ntBASIC17.67■□□□□ 0.42
NPAS4Q8IUM7 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.67■□□□□ 0.42
NPAS4Q8IUM7 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NPAS4Q8IUM7 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC17.67■□□□□ 0.42
NPAS4Q8IUM7 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.67■□□□□ 0.42
NPAS4Q8IUM7 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC17.67■□□□□ 0.42
NPAS4Q8IUM7 AL033527.5-202ENST00000641632 1098 ntBASIC17.67■□□□□ 0.42
NPAS4Q8IUM7 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.67■□□□□ 0.42
NPAS4Q8IUM7 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPAS4Q8IUM7 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPAS4Q8IUM7 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPAS4Q8IUM7 PP12613-201ENST00000424958 2230 ntBASIC17.67■□□□□ 0.42
NPAS4Q8IUM7 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPAS4Q8IUM7 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.67■□□□□ 0.42
NPAS4Q8IUM7 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.67■□□□□ 0.42
NPAS4Q8IUM7 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
NPAS4Q8IUM7 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.67■□□□□ 0.42
NPAS4Q8IUM7 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.67■□□□□ 0.42
NPAS4Q8IUM7 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
NPAS4Q8IUM7 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPAS4Q8IUM7 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPAS4Q8IUM7 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
NPAS4Q8IUM7 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPAS4Q8IUM7 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
NPAS4Q8IUM7 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
NPAS4Q8IUM7 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NPAS4Q8IUM7 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPAS4Q8IUM7 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPAS4Q8IUM7 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPAS4Q8IUM7 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPAS4Q8IUM7 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPAS4Q8IUM7 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
NPAS4Q8IUM7 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
NPAS4Q8IUM7 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC17.66■□□□□ 0.42
NPAS4Q8IUM7 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.66■□□□□ 0.42
NPAS4Q8IUM7 INE1-201ENST00000456273 945 ntBASIC17.66■□□□□ 0.42
NPAS4Q8IUM7 RN7SL752P-201ENST00000463779 287 ntBASIC17.66■□□□□ 0.42
NPAS4Q8IUM7 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NPAS4Q8IUM7 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.66■□□□□ 0.42
NPAS4Q8IUM7 POLE2-203ENST00000553805 496 ntTSL 2 BASIC17.66■□□□□ 0.42
NPAS4Q8IUM7 AC004790.1-201ENST00000612686 536 ntBASIC17.66■□□□□ 0.42
NPAS4Q8IUM7 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.66■□□□□ 0.42
NPAS4Q8IUM7 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.66■□□□□ 0.42
NPAS4Q8IUM7 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPAS4Q8IUM7 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.66■□□□□ 0.42
NPAS4Q8IUM7 AC018470.1-201ENST00000624790 3129 ntBASIC17.66■□□□□ 0.42
NPAS4Q8IUM7 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
NPAS4Q8IUM7 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
NPAS4Q8IUM7 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.66■□□□□ 0.42
NPAS4Q8IUM7 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPAS4Q8IUM7 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.66■□□□□ 0.42
NPAS4Q8IUM7 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.66■□□□□ 0.42
NPAS4Q8IUM7 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.66■□□□□ 0.42
NPAS4Q8IUM7 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC17.66■□□□□ 0.42
NPAS4Q8IUM7 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPAS4Q8IUM7 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms