Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
RFX6Q8HWS3 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFX6Q8HWS3 AC004870.1-201ENST00000315132 882 ntBASIC17.34■□□□□ 0.37
RFX6Q8HWS3 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFX6Q8HWS3 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.34■□□□□ 0.37
RFX6Q8HWS3 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.34■□□□□ 0.37
RFX6Q8HWS3 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.34■□□□□ 0.37
RFX6Q8HWS3 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.34■□□□□ 0.37
RFX6Q8HWS3 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFX6Q8HWS3 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RFX6Q8HWS3 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.34■□□□□ 0.37
RFX6Q8HWS3 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.34■□□□□ 0.37
RFX6Q8HWS3 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.34■□□□□ 0.37
RFX6Q8HWS3 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.34■□□□□ 0.37
RFX6Q8HWS3 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.34■□□□□ 0.37
RFX6Q8HWS3 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFX6Q8HWS3 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.34■□□□□ 0.37
RFX6Q8HWS3 AC129492.6-201ENST00000611383 1305 ntBASIC17.34■□□□□ 0.37
RFX6Q8HWS3 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
RFX6Q8HWS3 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
RFX6Q8HWS3 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFX6Q8HWS3 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RFX6Q8HWS3 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RFX6Q8HWS3 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.33■□□□□ 0.37
RFX6Q8HWS3 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.33■□□□□ 0.37
RFX6Q8HWS3 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.33■□□□□ 0.37
RFX6Q8HWS3 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RFX6Q8HWS3 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RFX6Q8HWS3 AL031731.1-201ENST00000642131 2094 ntBASIC17.33■□□□□ 0.37
RFX6Q8HWS3 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.33■□□□□ 0.37
RFX6Q8HWS3 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.33■□□□□ 0.37
RFX6Q8HWS3 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
RFX6Q8HWS3 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
RFX6Q8HWS3 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RFX6Q8HWS3 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.33■□□□□ 0.37
RFX6Q8HWS3 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RFX6Q8HWS3 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RFX6Q8HWS3 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
RFX6Q8HWS3 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RFX6Q8HWS3 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RFX6Q8HWS3 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.33■□□□□ 0.36
RFX6Q8HWS3 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.33■□□□□ 0.36
RFX6Q8HWS3 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RFX6Q8HWS3 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RFX6Q8HWS3 MRPL20P1-201ENST00000400819 433 ntBASIC17.33■□□□□ 0.36
RFX6Q8HWS3 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RFX6Q8HWS3 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.33■□□□□ 0.36
RFX6Q8HWS3 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.33■□□□□ 0.36
RFX6Q8HWS3 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RFX6Q8HWS3 AC087641.1-201ENST00000557561 1021 ntBASIC17.33■□□□□ 0.36
RFX6Q8HWS3 AC005412.3-201ENST00000580309 715 ntBASIC17.33■□□□□ 0.36
RFX6Q8HWS3 AL031008.1-201ENST00000619963 541 ntBASIC17.33■□□□□ 0.36
RFX6Q8HWS3 AC004790.2-201ENST00000623588 572 ntBASIC17.33■□□□□ 0.36
RFX6Q8HWS3 AP001350.2-201ENST00000625104 1094 ntBASIC17.33■□□□□ 0.36
RFX6Q8HWS3 FAM215A-202ENST00000632077 792 ntBASIC17.33■□□□□ 0.36
RFX6Q8HWS3 PGM5P2-202ENST00000637225 1043 ntBASIC17.33■□□□□ 0.36
RFX6Q8HWS3 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.33■□□□□ 0.36
RFX6Q8HWS3 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.33■□□□□ 0.36
RFX6Q8HWS3 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
RFX6Q8HWS3 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RFX6Q8HWS3 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RFX6Q8HWS3 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RFX6Q8HWS3 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
RFX6Q8HWS3 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RFX6Q8HWS3 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
RFX6Q8HWS3 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFX6Q8HWS3 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFX6Q8HWS3 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.32■□□□□ 0.36
RFX6Q8HWS3 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFX6Q8HWS3 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.32■□□□□ 0.36
RFX6Q8HWS3 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
RFX6Q8HWS3 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RFX6Q8HWS3 AC026691.1-201ENST00000602502 2017 ntBASIC17.32■□□□□ 0.36
RFX6Q8HWS3 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.32■□□□□ 0.36
RFX6Q8HWS3 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RFX6Q8HWS3 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RFX6Q8HWS3 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.32■□□□□ 0.36
RFX6Q8HWS3 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.32■□□□□ 0.36
RFX6Q8HWS3 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.32■□□□□ 0.36
RFX6Q8HWS3 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RFX6Q8HWS3 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RFX6Q8HWS3 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RFX6Q8HWS3 AL450487.1-201ENST00000426799 995 ntBASIC17.32■□□□□ 0.36
RFX6Q8HWS3 AC108073.2-201ENST00000464002 357 ntBASIC17.32■□□□□ 0.36
RFX6Q8HWS3 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RFX6Q8HWS3 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.32■□□□□ 0.36
RFX6Q8HWS3 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFX6Q8HWS3 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.32■□□□□ 0.36
RFX6Q8HWS3 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RFX6Q8HWS3 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.32■□□□□ 0.36
RFX6Q8HWS3 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RFX6Q8HWS3 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RFX6Q8HWS3 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.32■□□□□ 0.36
RFX6Q8HWS3 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.32■□□□□ 0.36
RFX6Q8HWS3 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.32■□□□□ 0.36
RFX6Q8HWS3 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
RFX6Q8HWS3 AC008741.2-201ENST00000612792 3115 ntBASIC17.32■□□□□ 0.36
RFX6Q8HWS3 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
RFX6Q8HWS3 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
RFX6Q8HWS3 AL391005.1-201ENST00000623953 2435 ntBASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms