Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CCDC149Q6ZUS6 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
CCDC149Q6ZUS6 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC149Q6ZUS6 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC149Q6ZUS6 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC149Q6ZUS6 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC149Q6ZUS6 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC149Q6ZUS6 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CCDC149Q6ZUS6 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CCDC149Q6ZUS6 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC149Q6ZUS6 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CCDC149Q6ZUS6 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CCDC149Q6ZUS6 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC149Q6ZUS6 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC149Q6ZUS6 FOXO1B-201ENST00000504678 1527 ntBASIC17.41■□□□□ 0.38
CCDC149Q6ZUS6 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.41■□□□□ 0.38
CCDC149Q6ZUS6 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CCDC149Q6ZUS6 AC067852.2-201ENST00000590513 2313 ntBASIC17.41■□□□□ 0.38
CCDC149Q6ZUS6 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC149Q6ZUS6 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CCDC149Q6ZUS6 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC149Q6ZUS6 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC149Q6ZUS6 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC149Q6ZUS6 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC149Q6ZUS6 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.4■□□□□ 0.38
CCDC149Q6ZUS6 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CCDC149Q6ZUS6 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC149Q6ZUS6 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC149Q6ZUS6 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC149Q6ZUS6 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CCDC149Q6ZUS6 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CCDC149Q6ZUS6 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC149Q6ZUS6 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.4■□□□□ 0.38
CCDC149Q6ZUS6 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.4■□□□□ 0.38
CCDC149Q6ZUS6 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.4■□□□□ 0.38
CCDC149Q6ZUS6 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CCDC149Q6ZUS6 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC149Q6ZUS6 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.4■□□□□ 0.38
CCDC149Q6ZUS6 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC149Q6ZUS6 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC149Q6ZUS6 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC149Q6ZUS6 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.4■□□□□ 0.38
CCDC149Q6ZUS6 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.4■□□□□ 0.38
CCDC149Q6ZUS6 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
CCDC149Q6ZUS6 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC149Q6ZUS6 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC149Q6ZUS6 NOC2LP2-201ENST00000407594 1944 ntBASIC17.4■□□□□ 0.38
CCDC149Q6ZUS6 AC092053.1-201ENST00000605787 1936 ntBASIC17.4■□□□□ 0.38
CCDC149Q6ZUS6 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CCDC149Q6ZUS6 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC149Q6ZUS6 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC149Q6ZUS6 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC149Q6ZUS6 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC149Q6ZUS6 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC149Q6ZUS6 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC149Q6ZUS6 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC149Q6ZUS6 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC149Q6ZUS6 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC149Q6ZUS6 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CCDC149Q6ZUS6 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CCDC149Q6ZUS6 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC149Q6ZUS6 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC149Q6ZUS6 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
CCDC149Q6ZUS6 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC149Q6ZUS6 ATP5G2P4-201ENST00000442175 420 ntBASIC17.39■□□□□ 0.37
CCDC149Q6ZUS6 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC149Q6ZUS6 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.39■□□□□ 0.37
CCDC149Q6ZUS6 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.39■□□□□ 0.37
CCDC149Q6ZUS6 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC149Q6ZUS6 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC149Q6ZUS6 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.39■□□□□ 0.37
CCDC149Q6ZUS6 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.39■□□□□ 0.37
CCDC149Q6ZUS6 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC149Q6ZUS6 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.39■□□□□ 0.37
CCDC149Q6ZUS6 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC149Q6ZUS6 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC149Q6ZUS6 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC149Q6ZUS6 AL671710.1-201ENST00000610245 2349 ntBASIC17.39■□□□□ 0.37
CCDC149Q6ZUS6 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
CCDC149Q6ZUS6 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC149Q6ZUS6 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CCDC149Q6ZUS6 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC149Q6ZUS6 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CCDC149Q6ZUS6 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CCDC149Q6ZUS6 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC149Q6ZUS6 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC149Q6ZUS6 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC149Q6ZUS6 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CCDC149Q6ZUS6 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC149Q6ZUS6 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC149Q6ZUS6 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC149Q6ZUS6 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC149Q6ZUS6 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC149Q6ZUS6 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC149Q6ZUS6 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC149Q6ZUS6 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC149Q6ZUS6 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC149Q6ZUS6 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC149Q6ZUS6 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CCDC149Q6ZUS6 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms