Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SHC4Q6S5L8 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC18.75■□□□□ 0.59
SHC4Q6S5L8 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
SHC4Q6S5L8 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC18.75■□□□□ 0.59
SHC4Q6S5L8 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHC4Q6S5L8 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SHC4Q6S5L8 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHC4Q6S5L8 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHC4Q6S5L8 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SHC4Q6S5L8 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHC4Q6S5L8 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
SHC4Q6S5L8 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHC4Q6S5L8 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHC4Q6S5L8 SUPT20HL2-201ENST00000486479 2409 ntBASIC18.74■□□□□ 0.59
SHC4Q6S5L8 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHC4Q6S5L8 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
SHC4Q6S5L8 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.74■□□□□ 0.59
SHC4Q6S5L8 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHC4Q6S5L8 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC18.74■□□□□ 0.59
SHC4Q6S5L8 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHC4Q6S5L8 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.74■□□□□ 0.59
SHC4Q6S5L8 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
SHC4Q6S5L8 AC004870.1-201ENST00000315132 882 ntBASIC18.74■□□□□ 0.59
SHC4Q6S5L8 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
SHC4Q6S5L8 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.74■□□□□ 0.59
SHC4Q6S5L8 IGLL3P-201ENST00000412472 434 ntBASIC18.74■□□□□ 0.59
SHC4Q6S5L8 AL450487.1-201ENST00000426799 995 ntBASIC18.74■□□□□ 0.59
SHC4Q6S5L8 AC098831.1-202ENST00000438821 336 ntBASIC18.74■□□□□ 0.59
SHC4Q6S5L8 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.74■□□□□ 0.59
SHC4Q6S5L8 PRSS29P-201ENST00000440800 595 ntBASIC18.74■□□□□ 0.59
SHC4Q6S5L8 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHC4Q6S5L8 AC108751.1-201ENST00000490852 363 ntBASIC18.74■□□□□ 0.59
SHC4Q6S5L8 CXCL1P1-201ENST00000502804 216 ntBASIC18.74■□□□□ 0.59
SHC4Q6S5L8 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.74■□□□□ 0.59
SHC4Q6S5L8 AL160237.2-201ENST00000556165 472 ntBASIC18.74■□□□□ 0.59
SHC4Q6S5L8 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.74■□□□□ 0.59
SHC4Q6S5L8 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.74■□□□□ 0.59
SHC4Q6S5L8 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.74■□□□□ 0.59
SHC4Q6S5L8 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHC4Q6S5L8 AL773604.1-201ENST00000617417 272 ntBASIC18.74■□□□□ 0.59
SHC4Q6S5L8 AC116407.3-201ENST00000623905 1129 ntBASIC18.74■□□□□ 0.59
SHC4Q6S5L8 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHC4Q6S5L8 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHC4Q6S5L8 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHC4Q6S5L8 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHC4Q6S5L8 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHC4Q6S5L8 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHC4Q6S5L8 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHC4Q6S5L8 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SHC4Q6S5L8 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.73■□□□□ 0.59
SHC4Q6S5L8 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SHC4Q6S5L8 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC18.73■□□□□ 0.59
SHC4Q6S5L8 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHC4Q6S5L8 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHC4Q6S5L8 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHC4Q6S5L8 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SHC4Q6S5L8 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SHC4Q6S5L8 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC18.73■□□□□ 0.59
SHC4Q6S5L8 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.73■□□□□ 0.59
SHC4Q6S5L8 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SHC4Q6S5L8 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHC4Q6S5L8 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHC4Q6S5L8 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHC4Q6S5L8 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.73■□□□□ 0.59
SHC4Q6S5L8 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SHC4Q6S5L8 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.73■□□□□ 0.59
SHC4Q6S5L8 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHC4Q6S5L8 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.73■□□□□ 0.59
SHC4Q6S5L8 AC020765.3-201ENST00000613051 740 ntBASIC18.73■□□□□ 0.59
SHC4Q6S5L8 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHC4Q6S5L8 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHC4Q6S5L8 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHC4Q6S5L8 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
SHC4Q6S5L8 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC18.73■□□□□ 0.59
SHC4Q6S5L8 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHC4Q6S5L8 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHC4Q6S5L8 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHC4Q6S5L8 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHC4Q6S5L8 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHC4Q6S5L8 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SHC4Q6S5L8 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.73■□□□□ 0.59
SHC4Q6S5L8 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHC4Q6S5L8 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHC4Q6S5L8 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.73■□□□□ 0.59
SHC4Q6S5L8 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
SHC4Q6S5L8 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHC4Q6S5L8 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SHC4Q6S5L8 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SHC4Q6S5L8 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SHC4Q6S5L8 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SHC4Q6S5L8 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SHC4Q6S5L8 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SHC4Q6S5L8 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SHC4Q6S5L8 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC18.72■□□□□ 0.59
SHC4Q6S5L8 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SHC4Q6S5L8 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.72■□□□□ 0.59
SHC4Q6S5L8 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SHC4Q6S5L8 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC18.72■□□□□ 0.59
SHC4Q6S5L8 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SHC4Q6S5L8 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms