Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTR9Q6PD62 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.72■□□□□ 0.75
CTR9Q6PD62 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTR9Q6PD62 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC19.72■□□□□ 0.75
CTR9Q6PD62 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.72■□□□□ 0.75
CTR9Q6PD62 KRT18P32-201ENST00000424695 1287 ntBASIC19.72■□□□□ 0.75
CTR9Q6PD62 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC19.72■□□□□ 0.75
CTR9Q6PD62 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.72■□□□□ 0.75
CTR9Q6PD62 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.72■□□□□ 0.75
CTR9Q6PD62 KRT18P34-201ENST00000488218 1270 ntBASIC19.72■□□□□ 0.75
CTR9Q6PD62 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC19.72■□□□□ 0.75
CTR9Q6PD62 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CTR9Q6PD62 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.72■□□□□ 0.75
CTR9Q6PD62 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.72■□□□□ 0.75
CTR9Q6PD62 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
CTR9Q6PD62 AP000842.3-202ENST00000569238 1080 ntBASIC19.72■□□□□ 0.75
CTR9Q6PD62 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CTR9Q6PD62 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC19.72■□□□□ 0.75
CTR9Q6PD62 LINC00628-201ENST00000628516 1289 ntBASIC19.72■□□□□ 0.75
CTR9Q6PD62 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC19.72■□□□□ 0.75
CTR9Q6PD62 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CTR9Q6PD62 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTR9Q6PD62 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CTR9Q6PD62 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CTR9Q6PD62 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CTR9Q6PD62 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.72■□□□□ 0.75
CTR9Q6PD62 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CTR9Q6PD62 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTR9Q6PD62 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CTR9Q6PD62 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTR9Q6PD62 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CTR9Q6PD62 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTR9Q6PD62 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.71■□□□□ 0.75
CTR9Q6PD62 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CTR9Q6PD62 UXT-AS1-201ENST00000590504 1525 ntBASIC19.71■□□□□ 0.75
CTR9Q6PD62 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTR9Q6PD62 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CTR9Q6PD62 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
CTR9Q6PD62 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTR9Q6PD62 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC19.71■□□□□ 0.75
CTR9Q6PD62 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CTR9Q6PD62 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.71■□□□□ 0.75
CTR9Q6PD62 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTR9Q6PD62 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CTR9Q6PD62 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CTR9Q6PD62 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTR9Q6PD62 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC19.71■□□□□ 0.75
CTR9Q6PD62 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
CTR9Q6PD62 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CTR9Q6PD62 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CTR9Q6PD62 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC19.71■□□□□ 0.75
CTR9Q6PD62 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC19.71■□□□□ 0.75
CTR9Q6PD62 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC19.71■□□□□ 0.75
CTR9Q6PD62 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTR9Q6PD62 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CTR9Q6PD62 SLC25A39P2-201ENST00000537614 270 ntBASIC19.71■□□□□ 0.75
CTR9Q6PD62 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CTR9Q6PD62 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC19.71■□□□□ 0.75
CTR9Q6PD62 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
CTR9Q6PD62 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTR9Q6PD62 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.71■□□□□ 0.75
CTR9Q6PD62 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CTR9Q6PD62 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CTR9Q6PD62 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CTR9Q6PD62 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTR9Q6PD62 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTR9Q6PD62 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTR9Q6PD62 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC19.71■□□□□ 0.75
CTR9Q6PD62 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CTR9Q6PD62 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTR9Q6PD62 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTR9Q6PD62 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTR9Q6PD62 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTR9Q6PD62 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
CTR9Q6PD62 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CTR9Q6PD62 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTR9Q6PD62 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTR9Q6PD62 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTR9Q6PD62 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTR9Q6PD62 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTR9Q6PD62 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTR9Q6PD62 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CTR9Q6PD62 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19.7■□□□□ 0.74
CTR9Q6PD62 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.7■□□□□ 0.74
CTR9Q6PD62 AL645939.2-201ENST00000427340 991 ntBASIC19.7■□□□□ 0.74
CTR9Q6PD62 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.7■□□□□ 0.74
CTR9Q6PD62 RFPL4AP1-201ENST00000530883 850 ntBASIC19.7■□□□□ 0.74
CTR9Q6PD62 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
CTR9Q6PD62 RPL28-205ENST00000558131 444 ntTSL 5 BASIC19.7■□□□□ 0.74
CTR9Q6PD62 AC004449.1-201ENST00000564240 433 ntBASIC19.7■□□□□ 0.74
CTR9Q6PD62 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CTR9Q6PD62 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CTR9Q6PD62 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC19.7■□□□□ 0.74
CTR9Q6PD62 NKG7-205ENST00000600427 520 ntTSL 3 BASIC19.7■□□□□ 0.74
CTR9Q6PD62 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.7■□□□□ 0.74
CTR9Q6PD62 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CTR9Q6PD62 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTR9Q6PD62 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTR9Q6PD62 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CTR9Q6PD62 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms