Protein–RNA interactions for Protein: Q6NT89

TRNP1, TMF-regulated nuclear protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1Q6NT89 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.25■□□□□ 0.35
TRNP1Q6NT89 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.25■□□□□ 0.35
TRNP1Q6NT89 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
TRNP1Q6NT89 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.25■□□□□ 0.35
TRNP1Q6NT89 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.25■□□□□ 0.35
TRNP1Q6NT89 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
TRNP1Q6NT89 AC002056.1-201ENST00000395613 760 ntBASIC17.25■□□□□ 0.35
TRNP1Q6NT89 AL355306.1-201ENST00000415580 579 ntBASIC17.25■□□□□ 0.35
TRNP1Q6NT89 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.25■□□□□ 0.35
TRNP1Q6NT89 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.25■□□□□ 0.35
TRNP1Q6NT89 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.25■□□□□ 0.35
TRNP1Q6NT89 AC112191.1-201ENST00000523689 701 ntBASIC17.25■□□□□ 0.35
TRNP1Q6NT89 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.25■□□□□ 0.35
TRNP1Q6NT89 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRNP1Q6NT89 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRNP1Q6NT89 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.25■□□□□ 0.35
TRNP1Q6NT89 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.25■□□□□ 0.35
TRNP1Q6NT89 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRNP1Q6NT89 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.25■□□□□ 0.35
TRNP1Q6NT89 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.25■□□□□ 0.35
TRNP1Q6NT89 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRNP1Q6NT89 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRNP1Q6NT89 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRNP1Q6NT89 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.25■□□□□ 0.35
TRNP1Q6NT89 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.25■□□□□ 0.35
TRNP1Q6NT89 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRNP1Q6NT89 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TRNP1Q6NT89 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRNP1Q6NT89 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRNP1Q6NT89 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.24■□□□□ 0.35
TRNP1Q6NT89 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRNP1Q6NT89 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.24■□□□□ 0.35
TRNP1Q6NT89 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.24■□□□□ 0.35
TRNP1Q6NT89 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.24■□□□□ 0.35
TRNP1Q6NT89 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRNP1Q6NT89 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TRNP1Q6NT89 WASH6P-202ENST00000359512 1437 ntBASIC17.24■□□□□ 0.35
TRNP1Q6NT89 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.24■□□□□ 0.35
TRNP1Q6NT89 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRNP1Q6NT89 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TRNP1Q6NT89 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.24■□□□□ 0.35
TRNP1Q6NT89 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.24■□□□□ 0.35
TRNP1Q6NT89 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRNP1Q6NT89 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRNP1Q6NT89 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.24■□□□□ 0.35
TRNP1Q6NT89 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.24■□□□□ 0.35
TRNP1Q6NT89 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.24■□□□□ 0.35
TRNP1Q6NT89 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TRNP1Q6NT89 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.24■□□□□ 0.35
TRNP1Q6NT89 AL138918.1-201ENST00000568306 659 ntBASIC17.24■□□□□ 0.35
TRNP1Q6NT89 C20orf181-201ENST00000623918 480 ntBASIC17.24■□□□□ 0.35
TRNP1Q6NT89 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRNP1Q6NT89 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.24■□□□□ 0.35
TRNP1Q6NT89 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRNP1Q6NT89 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TRNP1Q6NT89 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRNP1Q6NT89 AC005622.1-201ENST00000636801 1703 ntBASIC17.24■□□□□ 0.35
TRNP1Q6NT89 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.24■□□□□ 0.35
TRNP1Q6NT89 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
TRNP1Q6NT89 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRNP1Q6NT89 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.23■□□□□ 0.35
TRNP1Q6NT89 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRNP1Q6NT89 MTHFR-217ENST00000641820 1569 ntBASIC17.23■□□□□ 0.35
TRNP1Q6NT89 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TRNP1Q6NT89 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRNP1Q6NT89 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TRNP1Q6NT89 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRNP1Q6NT89 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRNP1Q6NT89 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.23■□□□□ 0.35
TRNP1Q6NT89 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.23■□□□□ 0.35
TRNP1Q6NT89 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRNP1Q6NT89 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRNP1Q6NT89 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRNP1Q6NT89 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRNP1Q6NT89 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRNP1Q6NT89 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TRNP1Q6NT89 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRNP1Q6NT89 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.23■□□□□ 0.35
TRNP1Q6NT89 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.23■□□□□ 0.35
TRNP1Q6NT89 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.23■□□□□ 0.35
TRNP1Q6NT89 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.23■□□□□ 0.35
TRNP1Q6NT89 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.23■□□□□ 0.35
TRNP1Q6NT89 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.23■□□□□ 0.35
TRNP1Q6NT89 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRNP1Q6NT89 AL391005.1-201ENST00000623953 2435 ntBASIC17.23■□□□□ 0.35
TRNP1Q6NT89 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRNP1Q6NT89 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRNP1Q6NT89 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRNP1Q6NT89 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.23■□□□□ 0.35
TRNP1Q6NT89 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRNP1Q6NT89 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRNP1Q6NT89 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRNP1Q6NT89 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.23■□□□□ 0.35
TRNP1Q6NT89 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.23■□□□□ 0.35
TRNP1Q6NT89 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.23■□□□□ 0.35
TRNP1Q6NT89 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TRNP1Q6NT89 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRNP1Q6NT89 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TRNP1Q6NT89 AC073439.1-201ENST00000624121 1774 ntBASIC17.23■□□□□ 0.35
TRNP1Q6NT89 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms