Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 UPF3AP2-201ENST00000457924 1132 ntBASIC13.83□□□□□ -0.2
RIPPLY3P57055 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.83□□□□□ -0.2
RIPPLY3P57055 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.83□□□□□ -0.2
RIPPLY3P57055 AC135586.1-201ENST00000539323 574 ntBASIC13.83□□□□□ -0.2
RIPPLY3P57055 THTPA-204ENST00000554970 569 ntTSL 4 BASIC13.83□□□□□ -0.2
RIPPLY3P57055 THTPA-206ENST00000556015 535 ntTSL 3 BASIC13.83□□□□□ -0.2
RIPPLY3P57055 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.83□□□□□ -0.2
RIPPLY3P57055 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.83□□□□□ -0.2
RIPPLY3P57055 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.83□□□□□ -0.2
RIPPLY3P57055 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC13.83□□□□□ -0.2
RIPPLY3P57055 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
RIPPLY3P57055 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RIPPLY3P57055 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RIPPLY3P57055 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RIPPLY3P57055 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC13.83□□□□□ -0.2
RIPPLY3P57055 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
RIPPLY3P57055 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC13.83□□□□□ -0.2
RIPPLY3P57055 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RIPPLY3P57055 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RIPPLY3P57055 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
RIPPLY3P57055 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RIPPLY3P57055 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RIPPLY3P57055 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RIPPLY3P57055 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC13.83□□□□□ -0.2
RIPPLY3P57055 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
RIPPLY3P57055 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
RIPPLY3P57055 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RIPPLY3P57055 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
RIPPLY3P57055 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC13.83□□□□□ -0.2
RIPPLY3P57055 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
RIPPLY3P57055 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC13.82□□□□□ -0.2
RIPPLY3P57055 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RIPPLY3P57055 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RIPPLY3P57055 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RIPPLY3P57055 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC13.82□□□□□ -0.2
RIPPLY3P57055 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
RIPPLY3P57055 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RIPPLY3P57055 BTBD7P1-201ENST00000447253 1453 ntBASIC13.82□□□□□ -0.2
RIPPLY3P57055 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC13.82□□□□□ -0.2
RIPPLY3P57055 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RIPPLY3P57055 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
RIPPLY3P57055 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RIPPLY3P57055 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RIPPLY3P57055 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RIPPLY3P57055 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
RIPPLY3P57055 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RIPPLY3P57055 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RIPPLY3P57055 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RIPPLY3P57055 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RIPPLY3P57055 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.82□□□□□ -0.2
RIPPLY3P57055 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RIPPLY3P57055 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
RIPPLY3P57055 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
RIPPLY3P57055 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RIPPLY3P57055 AC006033.1-201ENST00000440505 426 ntBASIC13.82□□□□□ -0.2
RIPPLY3P57055 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC13.82□□□□□ -0.2
RIPPLY3P57055 CTBP2P5-201ENST00000454986 1264 ntBASIC13.82□□□□□ -0.2
RIPPLY3P57055 ARTN-209ENST00000479128 471 ntTSL 3 BASIC13.82□□□□□ -0.2
RIPPLY3P57055 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.82□□□□□ -0.2
RIPPLY3P57055 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC13.82□□□□□ -0.2
RIPPLY3P57055 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC13.82□□□□□ -0.2
RIPPLY3P57055 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.82□□□□□ -0.2
RIPPLY3P57055 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.82□□□□□ -0.2
RIPPLY3P57055 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RIPPLY3P57055 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RIPPLY3P57055 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RIPPLY3P57055 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC13.82□□□□□ -0.2
RIPPLY3P57055 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
RIPPLY3P57055 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RIPPLY3P57055 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RIPPLY3P57055 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RIPPLY3P57055 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RIPPLY3P57055 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RIPPLY3P57055 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
RIPPLY3P57055 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC13.82□□□□□ -0.2
RIPPLY3P57055 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RIPPLY3P57055 AL161938.1-201ENST00000569833 2180 ntBASIC13.82□□□□□ -0.2
RIPPLY3P57055 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RIPPLY3P57055 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC13.82□□□□□ -0.2
RIPPLY3P57055 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RIPPLY3P57055 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RIPPLY3P57055 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RIPPLY3P57055 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RIPPLY3P57055 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC13.81□□□□□ -0.2
RIPPLY3P57055 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RIPPLY3P57055 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RIPPLY3P57055 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RIPPLY3P57055 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RIPPLY3P57055 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RIPPLY3P57055 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC13.81□□□□□ -0.2
RIPPLY3P57055 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RIPPLY3P57055 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RIPPLY3P57055 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RIPPLY3P57055 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RIPPLY3P57055 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.81□□□□□ -0.2
RIPPLY3P57055 AC005229.1-201ENST00000392885 409 ntBASIC13.81□□□□□ -0.2
RIPPLY3P57055 AL662890.1-201ENST00000396818 632 ntBASIC13.81□□□□□ -0.2
RIPPLY3P57055 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.81□□□□□ -0.2
RIPPLY3P57055 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC13.81□□□□□ -0.2
RIPPLY3P57055 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms