Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH8P55286 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH8P55286 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH8P55286 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CDH8P55286 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CDH8P55286 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.72■□□□□ 0.43
CDH8P55286 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.72■□□□□ 0.43
CDH8P55286 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH8P55286 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDH8P55286 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
CDH8P55286 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDH8P55286 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH8P55286 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH8P55286 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH8P55286 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH8P55286 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH8P55286 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.72■□□□□ 0.43
CDH8P55286 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH8P55286 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDH8P55286 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.72■□□□□ 0.43
CDH8P55286 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH8P55286 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.72■□□□□ 0.43
CDH8P55286 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.72■□□□□ 0.43
CDH8P55286 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.72■□□□□ 0.43
CDH8P55286 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
CDH8P55286 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.72■□□□□ 0.43
CDH8P55286 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH8P55286 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.72■□□□□ 0.43
CDH8P55286 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.72■□□□□ 0.43
CDH8P55286 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.72■□□□□ 0.43
CDH8P55286 AC026120.1-201ENST00000611536 926 ntBASIC17.72■□□□□ 0.43
CDH8P55286 AC105339.1-204ENST00000636249 355 ntBASIC17.72■□□□□ 0.43
CDH8P55286 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDH8P55286 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CDH8P55286 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
CDH8P55286 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH8P55286 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH8P55286 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.72■□□□□ 0.43
CDH8P55286 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.72■□□□□ 0.43
CDH8P55286 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH8P55286 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.72■□□□□ 0.43
CDH8P55286 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.72■□□□□ 0.43
CDH8P55286 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.72■□□□□ 0.43
CDH8P55286 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CDH8P55286 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH8P55286 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDH8P55286 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CDH8P55286 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDH8P55286 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.71■□□□□ 0.43
CDH8P55286 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.71■□□□□ 0.43
CDH8P55286 GGT3P-204ENST00000453783 1664 ntBASIC17.71■□□□□ 0.43
CDH8P55286 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH8P55286 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH8P55286 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.71■□□□□ 0.43
CDH8P55286 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CDH8P55286 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CDH8P55286 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.71■□□□□ 0.43
CDH8P55286 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH8P55286 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH8P55286 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CDH8P55286 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH8P55286 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CDH8P55286 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH8P55286 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH8P55286 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.71■□□□□ 0.43
CDH8P55286 AC004967.1-201ENST00000453589 447 ntBASIC17.71■□□□□ 0.43
CDH8P55286 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.71■□□□□ 0.43
CDH8P55286 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.71■□□□□ 0.43
CDH8P55286 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.71■□□□□ 0.43
CDH8P55286 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.71■□□□□ 0.43
CDH8P55286 AL138918.1-201ENST00000568306 659 ntBASIC17.71■□□□□ 0.43
CDH8P55286 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
CDH8P55286 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.71■□□□□ 0.43
CDH8P55286 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.71■□□□□ 0.43
CDH8P55286 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.71■□□□□ 0.43
CDH8P55286 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.71■□□□□ 0.43
CDH8P55286 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.71■□□□□ 0.43
CDH8P55286 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH8P55286 AL596442.2-201ENST00000610240 980 ntBASIC17.71■□□□□ 0.43
CDH8P55286 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDH8P55286 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CDH8P55286 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
CDH8P55286 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.71■□□□□ 0.43
CDH8P55286 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH8P55286 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDH8P55286 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH8P55286 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.42
CDH8P55286 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CDH8P55286 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.71■□□□□ 0.42
CDH8P55286 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH8P55286 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH8P55286 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH8P55286 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH8P55286 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH8P55286 OR6D1P-203ENST00000641209 4860 ntBASIC17.7■□□□□ 0.42
CDH8P55286 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.7■□□□□ 0.42
CDH8P55286 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH8P55286 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH8P55286 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
CDH8P55286 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms