Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.8■□□□□ 0.28
LIMK2P53671 AC022188.1-201ENST00000620960 1664 ntBASIC16.8■□□□□ 0.28
LIMK2P53671 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LIMK2P53671 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LIMK2P53671 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LIMK2P53671 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LIMK2P53671 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.8■□□□□ 0.28
LIMK2P53671 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
LIMK2P53671 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.8■□□□□ 0.28
LIMK2P53671 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LIMK2P53671 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LIMK2P53671 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.8■□□□□ 0.28
LIMK2P53671 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
LIMK2P53671 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
LIMK2P53671 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LIMK2P53671 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LIMK2P53671 SNX33P1-201ENST00000592116 1762 ntBASIC16.79■□□□□ 0.28
LIMK2P53671 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.79■□□□□ 0.28
LIMK2P53671 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.79■□□□□ 0.28
LIMK2P53671 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.79■□□□□ 0.28
LIMK2P53671 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LIMK2P53671 GGT3P-204ENST00000453783 1664 ntBASIC16.79■□□□□ 0.28
LIMK2P53671 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LIMK2P53671 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LIMK2P53671 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.79■□□□□ 0.28
LIMK2P53671 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LIMK2P53671 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LIMK2P53671 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LIMK2P53671 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LIMK2P53671 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LIMK2P53671 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LIMK2P53671 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.79■□□□□ 0.28
LIMK2P53671 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.79■□□□□ 0.28
LIMK2P53671 AC112482.1-201ENST00000492080 688 ntBASIC16.79■□□□□ 0.28
LIMK2P53671 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LIMK2P53671 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
LIMK2P53671 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.79■□□□□ 0.28
LIMK2P53671 AC008741.2-201ENST00000612792 3115 ntBASIC16.79■□□□□ 0.28
LIMK2P53671 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.79■□□□□ 0.28
LIMK2P53671 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.79■□□□□ 0.28
LIMK2P53671 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LIMK2P53671 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LIMK2P53671 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LIMK2P53671 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
LIMK2P53671 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LIMK2P53671 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
LIMK2P53671 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
LIMK2P53671 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
LIMK2P53671 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LIMK2P53671 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.78■□□□□ 0.28
LIMK2P53671 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LIMK2P53671 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
LIMK2P53671 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.78■□□□□ 0.28
LIMK2P53671 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LIMK2P53671 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
LIMK2P53671 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LIMK2P53671 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LIMK2P53671 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.78■□□□□ 0.28
LIMK2P53671 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.78■□□□□ 0.28
LIMK2P53671 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LIMK2P53671 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LIMK2P53671 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LIMK2P53671 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
LIMK2P53671 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.78■□□□□ 0.28
LIMK2P53671 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
LIMK2P53671 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.78■□□□□ 0.28
LIMK2P53671 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LIMK2P53671 AC023274.1-201ENST00000418278 595 ntBASIC16.78■□□□□ 0.28
LIMK2P53671 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LIMK2P53671 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.78■□□□□ 0.28
LIMK2P53671 MTDHP5-201ENST00000598980 586 ntBASIC16.78■□□□□ 0.28
LIMK2P53671 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.78■□□□□ 0.28
LIMK2P53671 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.78■□□□□ 0.28
LIMK2P53671 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LIMK2P53671 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LIMK2P53671 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
LIMK2P53671 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.78■□□□□ 0.28
LIMK2P53671 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
LIMK2P53671 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
LIMK2P53671 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LIMK2P53671 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LIMK2P53671 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
LIMK2P53671 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.78■□□□□ 0.28
LIMK2P53671 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LIMK2P53671 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LIMK2P53671 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LIMK2P53671 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LIMK2P53671 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LIMK2P53671 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LIMK2P53671 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.77■□□□□ 0.28
LIMK2P53671 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.77■□□□□ 0.28
LIMK2P53671 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LIMK2P53671 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LIMK2P53671 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LIMK2P53671 CRYGEP-201ENST00000412192 528 ntBASIC16.77■□□□□ 0.28
LIMK2P53671 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
LIMK2P53671 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LIMK2P53671 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.77■□□□□ 0.28
LIMK2P53671 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
LIMK2P53671 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms