Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MMP13P45452 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MMP13P45452 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
MMP13P45452 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MMP13P45452 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.34■□□□□ 0.37
MMP13P45452 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
MMP13P45452 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MMP13P45452 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MMP13P45452 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MMP13P45452 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.34■□□□□ 0.37
MMP13P45452 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.34■□□□□ 0.37
MMP13P45452 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.34■□□□□ 0.37
MMP13P45452 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.34■□□□□ 0.37
MMP13P45452 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.34■□□□□ 0.37
MMP13P45452 AC087163.2-201ENST00000457299 853 ntBASIC17.34■□□□□ 0.37
MMP13P45452 AP002490.2-201ENST00000524791 560 ntBASIC17.34■□□□□ 0.37
MMP13P45452 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
MMP13P45452 DUX4L17-201ENST00000557360 1267 ntBASIC17.34■□□□□ 0.37
MMP13P45452 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
MMP13P45452 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.34■□□□□ 0.37
MMP13P45452 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MMP13P45452 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MMP13P45452 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MMP13P45452 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.34■□□□□ 0.37
MMP13P45452 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MMP13P45452 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.33■□□□□ 0.37
MMP13P45452 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.33■□□□□ 0.37
MMP13P45452 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
MMP13P45452 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
MMP13P45452 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
MMP13P45452 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.33■□□□□ 0.37
MMP13P45452 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.37
MMP13P45452 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MMP13P45452 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
MMP13P45452 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.33■□□□□ 0.37
MMP13P45452 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.33■□□□□ 0.37
MMP13P45452 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
MMP13P45452 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MMP13P45452 AL021920.2-201ENST00000624828 1351 ntBASIC17.33■□□□□ 0.36
MMP13P45452 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
MMP13P45452 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
MMP13P45452 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MMP13P45452 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
MMP13P45452 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.33■□□□□ 0.36
MMP13P45452 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.33■□□□□ 0.36
MMP13P45452 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.33■□□□□ 0.36
MMP13P45452 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
MMP13P45452 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MMP13P45452 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MMP13P45452 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MMP13P45452 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
MMP13P45452 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
MMP13P45452 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MMP13P45452 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
MMP13P45452 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
MMP13P45452 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
MMP13P45452 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MMP13P45452 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.36
MMP13P45452 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.33■□□□□ 0.36
MMP13P45452 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MMP13P45452 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MMP13P45452 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MMP13P45452 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.32■□□□□ 0.36
MMP13P45452 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
MMP13P45452 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MMP13P45452 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
MMP13P45452 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MMP13P45452 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.32■□□□□ 0.36
MMP13P45452 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
MMP13P45452 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.32■□□□□ 0.36
MMP13P45452 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MMP13P45452 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
MMP13P45452 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.32■□□□□ 0.36
MMP13P45452 TUBB8P12-201ENST00000308911 1335 ntBASIC17.32■□□□□ 0.36
MMP13P45452 TUBB7P-202ENST00000428444 1305 ntBASIC17.32■□□□□ 0.36
MMP13P45452 TUBB8P7-204ENST00000567960 1332 ntBASIC17.32■□□□□ 0.36
MMP13P45452 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MMP13P45452 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MMP13P45452 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.32■□□□□ 0.36
MMP13P45452 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.32■□□□□ 0.36
MMP13P45452 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MMP13P45452 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
MMP13P45452 AL391256.1-201ENST00000443260 1855 ntBASIC17.32■□□□□ 0.36
MMP13P45452 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.32■□□□□ 0.36
MMP13P45452 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
MMP13P45452 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MMP13P45452 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.32■□□□□ 0.36
MMP13P45452 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
MMP13P45452 AL645728.1-201ENST00000366221 2101 ntBASIC17.32■□□□□ 0.36
MMP13P45452 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
MMP13P45452 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
MMP13P45452 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MMP13P45452 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
MMP13P45452 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MMP13P45452 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MMP13P45452 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MMP13P45452 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
MMP13P45452 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MMP13P45452 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
MMP13P45452 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms