Protein–RNA interactions for Protein: P43234

CTSO, Cathepsin O, humanhuman

Predicted RBP Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSOP43234 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTSOP43234 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTSOP43234 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTSOP43234 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CTSOP43234 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CTSOP43234 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTSOP43234 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.83■□□□□ 0.28
CTSOP43234 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.83■□□□□ 0.28
CTSOP43234 FAM86GP-201ENST00000448322 971 ntBASIC16.83■□□□□ 0.28
CTSOP43234 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CTSOP43234 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.83■□□□□ 0.28
CTSOP43234 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CTSOP43234 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.83■□□□□ 0.28
CTSOP43234 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CTSOP43234 AC069262.1-201ENST00000539058 672 ntBASIC16.83■□□□□ 0.28
CTSOP43234 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CTSOP43234 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.83■□□□□ 0.28
CTSOP43234 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.83■□□□□ 0.28
CTSOP43234 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CTSOP43234 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTSOP43234 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTSOP43234 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTSOP43234 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTSOP43234 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CTSOP43234 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CTSOP43234 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CTSOP43234 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTSOP43234 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CTSOP43234 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.82■□□□□ 0.28
CTSOP43234 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.82■□□□□ 0.28
CTSOP43234 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CTSOP43234 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTSOP43234 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTSOP43234 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.82■□□□□ 0.28
CTSOP43234 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.82■□□□□ 0.28
CTSOP43234 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTSOP43234 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTSOP43234 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTSOP43234 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTSOP43234 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CTSOP43234 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.82■□□□□ 0.28
CTSOP43234 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.82■□□□□ 0.28
CTSOP43234 AC105233.2-201ENST00000523697 349 ntBASIC16.82■□□□□ 0.28
CTSOP43234 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTSOP43234 AF228730.5-201ENST00000530288 346 ntBASIC16.82■□□□□ 0.28
CTSOP43234 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.82■□□□□ 0.28
CTSOP43234 AC073389.1-201ENST00000595595 795 ntBASIC16.82■□□□□ 0.28
CTSOP43234 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.82■□□□□ 0.28
CTSOP43234 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTSOP43234 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTSOP43234 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTSOP43234 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
CTSOP43234 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTSOP43234 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CTSOP43234 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTSOP43234 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTSOP43234 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CTSOP43234 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CTSOP43234 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTSOP43234 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTSOP43234 GGT4P-201ENST00000623672 1708 ntBASIC16.82■□□□□ 0.28
CTSOP43234 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTSOP43234 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTSOP43234 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
CTSOP43234 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTSOP43234 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.81■□□□□ 0.28
CTSOP43234 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTSOP43234 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CTSOP43234 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CTSOP43234 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CTSOP43234 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTSOP43234 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTSOP43234 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTSOP43234 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTSOP43234 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CTSOP43234 TUBB3P1-201ENST00000405796 1332 ntBASIC16.81■□□□□ 0.28
CTSOP43234 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.81■□□□□ 0.28
CTSOP43234 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.81■□□□□ 0.28
CTSOP43234 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CTSOP43234 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
CTSOP43234 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.81■□□□□ 0.28
CTSOP43234 MIR770-201ENST00000390219 98 ntBASIC16.81■□□□□ 0.28
CTSOP43234 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CTSOP43234 CNN2P2-201ENST00000443536 909 ntBASIC16.81■□□□□ 0.28
CTSOP43234 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.81■□□□□ 0.28
CTSOP43234 CNN2P3-201ENST00000450201 906 ntBASIC16.81■□□□□ 0.28
CTSOP43234 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CTSOP43234 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.81■□□□□ 0.28
CTSOP43234 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTSOP43234 AC005498.2-205ENST00000593218 784 ntBASIC16.81■□□□□ 0.28
CTSOP43234 AL390955.2-201ENST00000603032 514 ntBASIC16.81■□□□□ 0.28
CTSOP43234 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CTSOP43234 MIR6080-201ENST00000617359 66 ntBASIC16.81■□□□□ 0.28
CTSOP43234 AL136317.3-201ENST00000618497 906 ntBASIC16.81■□□□□ 0.28
CTSOP43234 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CTSOP43234 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTSOP43234 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.81■□□□□ 0.28
CTSOP43234 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTSOP43234 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTSOP43234 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms