Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
SLC1A3P43003 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SLC1A3P43003 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC1A3P43003 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.35■□□□□ 0.05
SLC1A3P43003 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SLC1A3P43003 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.35■□□□□ 0.05
SLC1A3P43003 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
SLC1A3P43003 AC026396.1-201ENST00000419388 421 ntBASIC15.35■□□□□ 0.05
SLC1A3P43003 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.35■□□□□ 0.05
SLC1A3P43003 AL662844.1-201ENST00000546340 181 ntBASIC15.35■□□□□ 0.05
SLC1A3P43003 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.35■□□□□ 0.05
SLC1A3P43003 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.35■□□□□ 0.05
SLC1A3P43003 AC091167.2-201ENST00000579581 588 ntBASIC15.35■□□□□ 0.05
SLC1A3P43003 MPDU1-223ENST00000582151 728 ntBASIC15.35■□□□□ 0.05
SLC1A3P43003 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC1A3P43003 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.35■□□□□ 0.05
SLC1A3P43003 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.35■□□□□ 0.05
SLC1A3P43003 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.35■□□□□ 0.05
SLC1A3P43003 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.35■□□□□ 0.05
SLC1A3P43003 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC1A3P43003 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC1A3P43003 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.35■□□□□ 0.05
SLC1A3P43003 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
SLC1A3P43003 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC1A3P43003 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.35■□□□□ 0.05
SLC1A3P43003 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC1A3P43003 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SLC1A3P43003 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.35■□□□□ 0.05
SLC1A3P43003 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC1A3P43003 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC1A3P43003 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC1A3P43003 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.35■□□□□ 0.05
SLC1A3P43003 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC1A3P43003 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC1A3P43003 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SLC1A3P43003 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SLC1A3P43003 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
SLC1A3P43003 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC1A3P43003 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC1A3P43003 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SLC1A3P43003 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
SLC1A3P43003 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC1A3P43003 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC1A3P43003 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.34■□□□□ 0.05
SLC1A3P43003 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC1A3P43003 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
SLC1A3P43003 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.34■□□□□ 0.05
SLC1A3P43003 HLA-J-202ENST00000469281 1241 ntBASIC15.34■□□□□ 0.05
SLC1A3P43003 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.05
SLC1A3P43003 AC093909.1-201ENST00000504731 1122 ntBASIC15.34■□□□□ 0.05
SLC1A3P43003 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.34■□□□□ 0.05
SLC1A3P43003 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.34■□□□□ 0.05
SLC1A3P43003 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.34■□□□□ 0.05
SLC1A3P43003 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.34■□□□□ 0.05
SLC1A3P43003 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.34■□□□□ 0.05
SLC1A3P43003 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC1A3P43003 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.34■□□□□ 0.05
SLC1A3P43003 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.34■□□□□ 0.05
SLC1A3P43003 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.34■□□□□ 0.05
SLC1A3P43003 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.34■□□□□ 0.05
SLC1A3P43003 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC1A3P43003 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC1A3P43003 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
SLC1A3P43003 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SLC1A3P43003 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.34■□□□□ 0.05
SLC1A3P43003 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.34■□□□□ 0.05
SLC1A3P43003 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.34■□□□□ 0.05
SLC1A3P43003 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC1A3P43003 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.34■□□□□ 0.05
SLC1A3P43003 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SLC1A3P43003 AL596257.1-201ENST00000641463 2694 ntBASIC15.33■□□□□ 0.05
SLC1A3P43003 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC1A3P43003 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC1A3P43003 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
SLC1A3P43003 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
SLC1A3P43003 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC1A3P43003 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC1A3P43003 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC1A3P43003 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC1A3P43003 MRPL20P1-201ENST00000400819 433 ntBASIC15.33■□□□□ 0.04
SLC1A3P43003 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC1A3P43003 AC092910.1-201ENST00000482027 1129 ntBASIC15.33■□□□□ 0.04
SLC1A3P43003 AC107918.2-201ENST00000530817 355 ntBASIC15.33■□□□□ 0.04
SLC1A3P43003 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.33■□□□□ 0.04
SLC1A3P43003 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.33■□□□□ 0.04
SLC1A3P43003 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC1A3P43003 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.33■□□□□ 0.04
SLC1A3P43003 AC117500.6-201ENST00000624871 588 ntBASIC15.33■□□□□ 0.04
SLC1A3P43003 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC1A3P43003 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC1A3P43003 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC1A3P43003 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
SLC1A3P43003 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.33■□□□□ 0.04
SLC1A3P43003 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.33■□□□□ 0.04
SLC1A3P43003 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
SLC1A3P43003 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC1A3P43003 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC1A3P43003 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC1A3P43003 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC1A3P43003 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms