Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTGFP29279 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTGFP29279 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTGFP29279 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CTGFP29279 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC18.46■□□□□ 0.55
CTGFP29279 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CTGFP29279 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTGFP29279 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.46■□□□□ 0.55
CTGFP29279 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC18.46■□□□□ 0.55
CTGFP29279 ACTG1P3-201ENST00000431775 1114 ntBASIC18.46■□□□□ 0.55
CTGFP29279 BCRP2-202ENST00000447763 634 ntBASIC18.46■□□□□ 0.55
CTGFP29279 AC007551.1-201ENST00000457394 519 ntBASIC18.46■□□□□ 0.55
CTGFP29279 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC18.46■□□□□ 0.55
CTGFP29279 BCRP6-201ENST00000510112 632 ntBASIC18.46■□□□□ 0.55
CTGFP29279 BCRP7-201ENST00000511549 544 ntBASIC18.46■□□□□ 0.55
CTGFP29279 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CTGFP29279 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTGFP29279 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC18.46■□□□□ 0.55
CTGFP29279 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC18.46■□□□□ 0.55
CTGFP29279 PIGL-212ENST00000581006 554 ntTSL 4 BASIC18.46■□□□□ 0.55
CTGFP29279 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC18.46■□□□□ 0.55
CTGFP29279 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CTGFP29279 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTGFP29279 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CTGFP29279 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTGFP29279 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTGFP29279 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC18.46■□□□□ 0.55
CTGFP29279 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CTGFP29279 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.46■□□□□ 0.55
CTGFP29279 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTGFP29279 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CTGFP29279 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CTGFP29279 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.46■□□□□ 0.55
CTGFP29279 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC18.46■□□□□ 0.54
CTGFP29279 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTGFP29279 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CTGFP29279 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTGFP29279 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.45■□□□□ 0.54
CTGFP29279 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CTGFP29279 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.45■□□□□ 0.54
CTGFP29279 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTGFP29279 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTGFP29279 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTGFP29279 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTGFP29279 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CTGFP29279 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC18.45■□□□□ 0.54
CTGFP29279 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC18.45■□□□□ 0.54
CTGFP29279 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.45■□□□□ 0.54
CTGFP29279 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.45■□□□□ 0.54
CTGFP29279 AC020765.3-201ENST00000613051 740 ntBASIC18.45■□□□□ 0.54
CTGFP29279 CU634019.7-201ENST00000624153 1185 ntBASIC18.45■□□□□ 0.54
CTGFP29279 FP236241.2-201ENST00000624906 1185 ntBASIC18.45■□□□□ 0.54
CTGFP29279 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC18.45■□□□□ 0.54
CTGFP29279 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTGFP29279 DEK-201ENST00000244776 1441 ntTSL 2 BASIC18.45■□□□□ 0.54
CTGFP29279 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTGFP29279 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC18.45■□□□□ 0.54
CTGFP29279 KRT8P22-201ENST00000562317 1415 ntBASIC18.45■□□□□ 0.54
CTGFP29279 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CTGFP29279 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CTGFP29279 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.45■□□□□ 0.54
CTGFP29279 AC008764.6-201ENST00000595909 2069 ntBASIC18.45■□□□□ 0.54
CTGFP29279 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTGFP29279 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CTGFP29279 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
CTGFP29279 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
CTGFP29279 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC18.44■□□□□ 0.54
CTGFP29279 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTGFP29279 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTGFP29279 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTGFP29279 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
CTGFP29279 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CTGFP29279 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
CTGFP29279 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTGFP29279 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTGFP29279 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CTGFP29279 FO681548.1-201ENST00000455617 1132 ntBASIC18.44■□□□□ 0.54
CTGFP29279 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC18.44■□□□□ 0.54
CTGFP29279 TDH-203ENST00000531764 1110 ntBASIC18.44■□□□□ 0.54
CTGFP29279 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC18.44■□□□□ 0.54
CTGFP29279 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC18.44■□□□□ 0.54
CTGFP29279 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
CTGFP29279 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC18.44■□□□□ 0.54
CTGFP29279 AL158212.4-201ENST00000624062 1286 ntBASIC18.44■□□□□ 0.54
CTGFP29279 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC18.44■□□□□ 0.54
CTGFP29279 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTGFP29279 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
CTGFP29279 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CTGFP29279 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTGFP29279 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTGFP29279 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CTGFP29279 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTGFP29279 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CTGFP29279 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTGFP29279 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTGFP29279 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTGFP29279 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.44■□□□□ 0.54
CTGFP29279 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.43■□□□□ 0.54
CTGFP29279 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CTGFP29279 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms