Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
PTPN3P26045 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PTPN3P26045 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
PTPN3P26045 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
PTPN3P26045 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.96■□□□□ 0.3
PTPN3P26045 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PTPN3P26045 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.96■□□□□ 0.3
PTPN3P26045 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PTPN3P26045 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PTPN3P26045 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PTPN3P26045 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
PTPN3P26045 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PTPN3P26045 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
PTPN3P26045 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN3P26045 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN3P26045 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.95■□□□□ 0.3
PTPN3P26045 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN3P26045 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PTPN3P26045 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
PTPN3P26045 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
PTPN3P26045 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
PTPN3P26045 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN3P26045 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.95■□□□□ 0.3
PTPN3P26045 KRT18P2-201ENST00000447938 1258 ntBASIC16.95■□□□□ 0.3
PTPN3P26045 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.95■□□□□ 0.3
PTPN3P26045 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.95■□□□□ 0.3
PTPN3P26045 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN3P26045 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.95■□□□□ 0.3
PTPN3P26045 AC018845.2-201ENST00000568326 409 ntBASIC16.95■□□□□ 0.3
PTPN3P26045 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
PTPN3P26045 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.95■□□□□ 0.3
PTPN3P26045 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.95■□□□□ 0.3
PTPN3P26045 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
PTPN3P26045 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.95■□□□□ 0.3
PTPN3P26045 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.95■□□□□ 0.3
PTPN3P26045 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN3P26045 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.95■□□□□ 0.3
PTPN3P26045 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN3P26045 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN3P26045 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN3P26045 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.95■□□□□ 0.3
PTPN3P26045 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN3P26045 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.95■□□□□ 0.3
PTPN3P26045 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN3P26045 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN3P26045 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PTPN3P26045 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.94■□□□□ 0.3
PTPN3P26045 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN3P26045 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN3P26045 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN3P26045 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PTPN3P26045 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN3P26045 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN3P26045 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN3P26045 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN3P26045 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN3P26045 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN3P26045 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN3P26045 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN3P26045 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.94■□□□□ 0.3
PTPN3P26045 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.94■□□□□ 0.3
PTPN3P26045 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN3P26045 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN3P26045 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.94■□□□□ 0.3
PTPN3P26045 AC026396.1-201ENST00000419388 421 ntBASIC16.94■□□□□ 0.3
PTPN3P26045 AC007967.2-201ENST00000432613 625 ntBASIC16.94■□□□□ 0.3
PTPN3P26045 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.94■□□□□ 0.3
PTPN3P26045 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.94■□□□□ 0.3
PTPN3P26045 MIR3909-201ENST00000579518 119 ntBASIC16.94■□□□□ 0.3
PTPN3P26045 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.94■□□□□ 0.3
PTPN3P26045 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.94■□□□□ 0.3
PTPN3P26045 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.94■□□□□ 0.3
PTPN3P26045 AC023141.13-201ENST00000604991 943 ntBASIC16.94■□□□□ 0.3
PTPN3P26045 BX640515.1-201ENST00000617215 977 ntBASIC16.94■□□□□ 0.3
PTPN3P26045 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN3P26045 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN3P26045 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.94■□□□□ 0.3
PTPN3P26045 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN3P26045 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN3P26045 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.94■□□□□ 0.3
PTPN3P26045 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.94■□□□□ 0.3
PTPN3P26045 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PTPN3P26045 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.94■□□□□ 0.3
PTPN3P26045 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.94■□□□□ 0.3
PTPN3P26045 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN3P26045 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN3P26045 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN3P26045 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN3P26045 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.94■□□□□ 0.3
PTPN3P26045 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN3P26045 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN3P26045 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN3P26045 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.93■□□□□ 0.3
PTPN3P26045 LINC01144-201ENST00000626198 1710 ntBASIC16.93■□□□□ 0.3
PTPN3P26045 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN3P26045 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN3P26045 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN3P26045 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN3P26045 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PTPN3P26045 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms