Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MMP11P24347 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
MMP11P24347 HMGA1P7-201ENST00000406908 502 ntBASIC15.8■□□□□ 0.12
MMP11P24347 AL355306.1-201ENST00000415580 579 ntBASIC15.8■□□□□ 0.12
MMP11P24347 HCG4-201ENST00000418983 998 ntBASIC15.8■□□□□ 0.12
MMP11P24347 AL645939.2-201ENST00000427340 991 ntBASIC15.8■□□□□ 0.12
MMP11P24347 AL671277.1-201ENST00000429656 993 ntBASIC15.8■□□□□ 0.12
MMP11P24347 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.8■□□□□ 0.12
MMP11P24347 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
MMP11P24347 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.8■□□□□ 0.12
MMP11P24347 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.8■□□□□ 0.12
MMP11P24347 AC099522.2-201ENST00000607001 744 ntBASIC15.8■□□□□ 0.12
MMP11P24347 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
MMP11P24347 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MMP11P24347 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.8■□□□□ 0.12
MMP11P24347 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.8■□□□□ 0.12
MMP11P24347 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.8■□□□□ 0.12
MMP11P24347 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MMP11P24347 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
MMP11P24347 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.8■□□□□ 0.12
MMP11P24347 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.8■□□□□ 0.12
MMP11P24347 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.8■□□□□ 0.12
MMP11P24347 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MMP11P24347 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MMP11P24347 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MMP11P24347 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.79■□□□□ 0.12
MMP11P24347 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.79■□□□□ 0.12
MMP11P24347 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.79■□□□□ 0.12
MMP11P24347 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
MMP11P24347 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
MMP11P24347 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
MMP11P24347 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
MMP11P24347 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MMP11P24347 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MMP11P24347 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.79■□□□□ 0.12
MMP11P24347 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MMP11P24347 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MMP11P24347 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.79■□□□□ 0.12
MMP11P24347 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MMP11P24347 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
MMP11P24347 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MMP11P24347 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MMP11P24347 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MMP11P24347 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
MMP11P24347 TSEN15P1-201ENST00000423257 515 ntBASIC15.79■□□□□ 0.12
MMP11P24347 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
MMP11P24347 RFPL4AP1-201ENST00000530883 850 ntBASIC15.79■□□□□ 0.12
MMP11P24347 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
MMP11P24347 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.79■□□□□ 0.12
MMP11P24347 AC091167.2-201ENST00000579581 588 ntBASIC15.79■□□□□ 0.12
MMP11P24347 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MMP11P24347 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MMP11P24347 AC026120.1-201ENST00000611536 926 ntBASIC15.79■□□□□ 0.12
MMP11P24347 AL161645.1-201ENST00000622716 1255 ntBASIC15.79■□□□□ 0.12
MMP11P24347 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.79■□□□□ 0.12
MMP11P24347 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MMP11P24347 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MMP11P24347 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
MMP11P24347 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MMP11P24347 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MMP11P24347 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MMP11P24347 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MMP11P24347 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
MMP11P24347 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MMP11P24347 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MMP11P24347 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.79■□□□□ 0.12
MMP11P24347 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.78■□□□□ 0.12
MMP11P24347 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
MMP11P24347 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.78■□□□□ 0.12
MMP11P24347 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.78■□□□□ 0.12
MMP11P24347 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
MMP11P24347 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MMP11P24347 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MMP11P24347 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.78■□□□□ 0.12
MMP11P24347 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.78■□□□□ 0.12
MMP11P24347 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
MMP11P24347 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MMP11P24347 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MMP11P24347 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
MMP11P24347 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MMP11P24347 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
MMP11P24347 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.78■□□□□ 0.12
MMP11P24347 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.78■□□□□ 0.12
MMP11P24347 HMGN1P19-201ENST00000436976 333 ntBASIC15.78■□□□□ 0.12
MMP11P24347 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.78■□□□□ 0.12
MMP11P24347 RN7SL589P-201ENST00000481268 310 ntBASIC15.78■□□□□ 0.12
MMP11P24347 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
MMP11P24347 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.78■□□□□ 0.12
MMP11P24347 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MMP11P24347 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
MMP11P24347 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MMP11P24347 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MMP11P24347 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.78■□□□□ 0.12
MMP11P24347 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
MMP11P24347 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
MMP11P24347 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
MMP11P24347 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.78■□□□□ 0.12
MMP11P24347 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MMP11P24347 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MMP11P24347 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms