Protein–RNA interactions for Protein: P12814

ACTN1, Alpha-actinin-1, humanhuman

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1P12814 GK-202ENST00000378941 458 ntTSL 3 BASIC18.66■□□□□ 0.58
ACTN1P12814 BAD-202ENST00000394531 631 ntTSL 3 BASIC18.66■□□□□ 0.58
ACTN1P12814 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.66■□□□□ 0.58
ACTN1P12814 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.66■□□□□ 0.58
ACTN1P12814 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.66■□□□□ 0.58
ACTN1P12814 RBPMS2P1-201ENST00000437762 623 ntBASIC18.66■□□□□ 0.58
ACTN1P12814 FAM207CP-201ENST00000443486 507 ntBASIC18.66■□□□□ 0.58
ACTN1P12814 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.66■□□□□ 0.58
ACTN1P12814 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.66■□□□□ 0.58
ACTN1P12814 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18.66■□□□□ 0.58
ACTN1P12814 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.66■□□□□ 0.58
ACTN1P12814 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
ACTN1P12814 AC243562.1-201ENST00000560672 389 ntBASIC18.66■□□□□ 0.58
ACTN1P12814 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ACTN1P12814 RN7SL204P-201ENST00000582831 262 ntBASIC18.66■□□□□ 0.58
ACTN1P12814 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.66■□□□□ 0.58
ACTN1P12814 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.66■□□□□ 0.58
ACTN1P12814 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ACTN1P12814 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
ACTN1P12814 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
ACTN1P12814 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ACTN1P12814 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ACTN1P12814 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.66■□□□□ 0.58
ACTN1P12814 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ACTN1P12814 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ACTN1P12814 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
ACTN1P12814 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
ACTN1P12814 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ACTN1P12814 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
ACTN1P12814 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.65■□□□□ 0.58
ACTN1P12814 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
ACTN1P12814 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.65■□□□□ 0.58
ACTN1P12814 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ACTN1P12814 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ACTN1P12814 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ACTN1P12814 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
ACTN1P12814 SPDYE7P-202ENST00000420373 878 ntBASIC18.65■□□□□ 0.58
ACTN1P12814 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ACTN1P12814 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.65■□□□□ 0.58
ACTN1P12814 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ACTN1P12814 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ACTN1P12814 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ACTN1P12814 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.65■□□□□ 0.58
ACTN1P12814 IGHV3-42-201ENST00000520410 361 ntBASIC18.65■□□□□ 0.58
ACTN1P12814 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.65■□□□□ 0.58
ACTN1P12814 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.65■□□□□ 0.58
ACTN1P12814 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.65■□□□□ 0.58
ACTN1P12814 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.65■□□□□ 0.58
ACTN1P12814 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.65■□□□□ 0.58
ACTN1P12814 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ACTN1P12814 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ACTN1P12814 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
ACTN1P12814 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ACTN1P12814 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ACTN1P12814 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ACTN1P12814 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.65■□□□□ 0.58
ACTN1P12814 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
ACTN1P12814 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ACTN1P12814 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.64■□□□□ 0.58
ACTN1P12814 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC18.64■□□□□ 0.58
ACTN1P12814 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.64■□□□□ 0.58
ACTN1P12814 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
ACTN1P12814 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
ACTN1P12814 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
ACTN1P12814 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ACTN1P12814 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ACTN1P12814 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ACTN1P12814 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
ACTN1P12814 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.64■□□□□ 0.57
ACTN1P12814 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ACTN1P12814 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.64■□□□□ 0.57
ACTN1P12814 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ACTN1P12814 FAM58DP-201ENST00000428076 619 ntBASIC18.64■□□□□ 0.57
ACTN1P12814 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.64■□□□□ 0.57
ACTN1P12814 AL512638.1-201ENST00000457493 794 ntBASIC18.64■□□□□ 0.57
ACTN1P12814 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ACTN1P12814 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ACTN1P12814 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ACTN1P12814 AC140878.1-201ENST00000565277 250 ntBASIC18.64■□□□□ 0.57
ACTN1P12814 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.64■□□□□ 0.57
ACTN1P12814 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.64■□□□□ 0.57
ACTN1P12814 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ACTN1P12814 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ACTN1P12814 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.64■□□□□ 0.57
ACTN1P12814 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ACTN1P12814 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.64■□□□□ 0.57
ACTN1P12814 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.64■□□□□ 0.57
ACTN1P12814 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ACTN1P12814 FRMD8P1-201ENST00000440433 1524 ntBASIC18.64■□□□□ 0.57
ACTN1P12814 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ACTN1P12814 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ACTN1P12814 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ACTN1P12814 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.63■□□□□ 0.57
ACTN1P12814 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
ACTN1P12814 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ACTN1P12814 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ACTN1P12814 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ACTN1P12814 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
ACTN1P12814 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ACTN1P12814 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms