Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNB1P11230 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.81■□□□□ 0.28
CHRNB1P11230 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
CHRNB1P11230 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNB1P11230 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CHRNB1P11230 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNB1P11230 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CHRNB1P11230 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
CHRNB1P11230 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNB1P11230 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.81■□□□□ 0.28
CHRNB1P11230 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNB1P11230 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.81■□□□□ 0.28
CHRNB1P11230 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNB1P11230 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.8■□□□□ 0.28
CHRNB1P11230 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNB1P11230 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.8■□□□□ 0.28
CHRNB1P11230 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
CHRNB1P11230 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.8■□□□□ 0.28
CHRNB1P11230 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
CHRNB1P11230 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CHRNB1P11230 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNB1P11230 AC073439.1-201ENST00000624121 1774 ntBASIC16.8■□□□□ 0.28
CHRNB1P11230 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNB1P11230 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNB1P11230 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNB1P11230 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNB1P11230 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNB1P11230 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNB1P11230 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNB1P11230 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNB1P11230 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
CHRNB1P11230 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
CHRNB1P11230 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNB1P11230 AC105021.1-202ENST00000570572 669 ntBASIC16.8■□□□□ 0.28
CHRNB1P11230 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.8■□□□□ 0.28
CHRNB1P11230 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.8■□□□□ 0.28
CHRNB1P11230 AL133215.2-201ENST00000609242 977 ntBASIC16.8■□□□□ 0.28
CHRNB1P11230 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.8■□□□□ 0.28
CHRNB1P11230 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNB1P11230 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNB1P11230 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.8■□□□□ 0.28
CHRNB1P11230 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CHRNB1P11230 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNB1P11230 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.8■□□□□ 0.28
CHRNB1P11230 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNB1P11230 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNB1P11230 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNB1P11230 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.8■□□□□ 0.28
CHRNB1P11230 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNB1P11230 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNB1P11230 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNB1P11230 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
CHRNB1P11230 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNB1P11230 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.79■□□□□ 0.28
CHRNB1P11230 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CHRNB1P11230 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CHRNB1P11230 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.79■□□□□ 0.28
CHRNB1P11230 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CHRNB1P11230 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.79■□□□□ 0.28
CHRNB1P11230 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNB1P11230 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CHRNB1P11230 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNB1P11230 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNB1P11230 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNB1P11230 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNB1P11230 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CHRNB1P11230 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CHRNB1P11230 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNB1P11230 DGCR5-201ENST00000399539 862 ntBASIC16.79■□□□□ 0.28
CHRNB1P11230 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.79■□□□□ 0.28
CHRNB1P11230 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
CHRNB1P11230 GNAQP1-201ENST00000444815 1067 ntBASIC16.79■□□□□ 0.28
CHRNB1P11230 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.79■□□□□ 0.28
CHRNB1P11230 GIMAP3P-201ENST00000495150 836 ntBASIC16.79■□□□□ 0.28
CHRNB1P11230 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CHRNB1P11230 AC135586.1-201ENST00000539323 574 ntBASIC16.79■□□□□ 0.28
CHRNB1P11230 HILS1-202ENST00000545329 423 ntBASIC16.79■□□□□ 0.28
CHRNB1P11230 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC16.79■□□□□ 0.28
CHRNB1P11230 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.79■□□□□ 0.28
CHRNB1P11230 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.79■□□□□ 0.28
CHRNB1P11230 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.79■□□□□ 0.28
CHRNB1P11230 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNB1P11230 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.79■□□□□ 0.28
CHRNB1P11230 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNB1P11230 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.79■□□□□ 0.28
CHRNB1P11230 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHRNB1P11230 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHRNB1P11230 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.78■□□□□ 0.28
CHRNB1P11230 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHRNB1P11230 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.78■□□□□ 0.28
CHRNB1P11230 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CHRNB1P11230 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHRNB1P11230 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
CHRNB1P11230 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.78■□□□□ 0.28
CHRNB1P11230 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CHRNB1P11230 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.78■□□□□ 0.28
CHRNB1P11230 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CHRNB1P11230 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.78■□□□□ 0.28
CHRNB1P11230 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.78■□□□□ 0.28
CHRNB1P11230 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms