Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGHV3-43DP0DP04 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGHV3-43DP0DP04 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC13.88□□□□□ -0.19
IGHV3-43DP0DP04 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC13.88□□□□□ -0.19
IGHV3-43DP0DP04 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC13.88□□□□□ -0.19
IGHV3-43DP0DP04 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
IGHV3-43DP0DP04 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGHV3-43DP0DP04 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
IGHV3-43DP0DP04 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC13.88□□□□□ -0.19
IGHV3-43DP0DP04 AC006538.1-201ENST00000567905 1585 ntBASIC13.88□□□□□ -0.19
IGHV3-43DP0DP04 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
IGHV3-43DP0DP04 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
IGHV3-43DP0DP04 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC13.87□□□□□ -0.19
IGHV3-43DP0DP04 AL671710.1-201ENST00000610245 2349 ntBASIC13.87□□□□□ -0.19
IGHV3-43DP0DP04 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
IGHV3-43DP0DP04 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
IGHV3-43DP0DP04 AP002414.3-201ENST00000589352 1468 ntBASIC13.87□□□□□ -0.19
IGHV3-43DP0DP04 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC13.87□□□□□ -0.19
IGHV3-43DP0DP04 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
IGHV3-43DP0DP04 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
IGHV3-43DP0DP04 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
IGHV3-43DP0DP04 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
IGHV3-43DP0DP04 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
IGHV3-43DP0DP04 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
IGHV3-43DP0DP04 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
IGHV3-43DP0DP04 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
IGHV3-43DP0DP04 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC13.87□□□□□ -0.19
IGHV3-43DP0DP04 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
IGHV3-43DP0DP04 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC13.87□□□□□ -0.19
IGHV3-43DP0DP04 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
IGHV3-43DP0DP04 AC073621.1-201ENST00000392730 636 ntBASIC13.87□□□□□ -0.19
IGHV3-43DP0DP04 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC13.87□□□□□ -0.19
IGHV3-43DP0DP04 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC13.87□□□□□ -0.19
IGHV3-43DP0DP04 HNRNPDP1-201ENST00000439535 754 ntBASIC13.87□□□□□ -0.19
IGHV3-43DP0DP04 AC079781.3-201ENST00000449110 356 ntBASIC13.87□□□□□ -0.19
IGHV3-43DP0DP04 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
IGHV3-43DP0DP04 AC136632.2-201ENST00000512891 861 ntBASIC13.87□□□□□ -0.19
IGHV3-43DP0DP04 MOK-208ENST00000519058 917 ntTSL 2 BASIC13.87□□□□□ -0.19
IGHV3-43DP0DP04 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
IGHV3-43DP0DP04 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
IGHV3-43DP0DP04 MIR1199-201ENST00000621445 119 ntBASIC13.87□□□□□ -0.19
IGHV3-43DP0DP04 AC148477.8-201ENST00000624298 468 ntBASIC13.87□□□□□ -0.19
IGHV3-43DP0DP04 AF228730.7-201ENST00000641842 219 ntBASIC13.87□□□□□ -0.19
IGHV3-43DP0DP04 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
IGHV3-43DP0DP04 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
IGHV3-43DP0DP04 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
IGHV3-43DP0DP04 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
IGHV3-43DP0DP04 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
IGHV3-43DP0DP04 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC13.87□□□□□ -0.19
IGHV3-43DP0DP04 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
IGHV3-43DP0DP04 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
IGHV3-43DP0DP04 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC13.87□□□□□ -0.19
IGHV3-43DP0DP04 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
IGHV3-43DP0DP04 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
IGHV3-43DP0DP04 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
IGHV3-43DP0DP04 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
IGHV3-43DP0DP04 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC13.87□□□□□ -0.19
IGHV3-43DP0DP04 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
IGHV3-43DP0DP04 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
IGHV3-43DP0DP04 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.86□□□□□ -0.19
IGHV3-43DP0DP04 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
IGHV3-43DP0DP04 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
IGHV3-43DP0DP04 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
IGHV3-43DP0DP04 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
IGHV3-43DP0DP04 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
IGHV3-43DP0DP04 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
IGHV3-43DP0DP04 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
IGHV3-43DP0DP04 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
IGHV3-43DP0DP04 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
IGHV3-43DP0DP04 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
IGHV3-43DP0DP04 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC13.86□□□□□ -0.19
IGHV3-43DP0DP04 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC13.86□□□□□ -0.19
IGHV3-43DP0DP04 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC13.86□□□□□ -0.19
IGHV3-43DP0DP04 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC13.86□□□□□ -0.19
IGHV3-43DP0DP04 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
IGHV3-43DP0DP04 INIP-202ENST00000374236 874 ntTSL 2 BASIC13.86□□□□□ -0.19
IGHV3-43DP0DP04 CENPM-204ENST00000402420 688 ntTSL 5 BASIC13.86□□□□□ -0.19
IGHV3-43DP0DP04 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC13.86□□□□□ -0.19
IGHV3-43DP0DP04 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC13.86□□□□□ -0.19
IGHV3-43DP0DP04 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
IGHV3-43DP0DP04 AF186996.4-201ENST00000467186 377 ntBASIC13.86□□□□□ -0.19
IGHV3-43DP0DP04 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC13.86□□□□□ -0.19
IGHV3-43DP0DP04 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC13.86□□□□□ -0.19
IGHV3-43DP0DP04 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC13.86□□□□□ -0.19
IGHV3-43DP0DP04 AC012640.2-201ENST00000561606 901 ntBASIC13.86□□□□□ -0.19
IGHV3-43DP0DP04 AC013467.2-201ENST00000605472 835 ntBASIC13.86□□□□□ -0.19
IGHV3-43DP0DP04 AL691432.3-201ENST00000621860 400 ntBASIC13.86□□□□□ -0.19
IGHV3-43DP0DP04 REXO1L3P-201ENST00000622202 1288 ntBASIC13.86□□□□□ -0.19
IGHV3-43DP0DP04 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
IGHV3-43DP0DP04 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
IGHV3-43DP0DP04 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
IGHV3-43DP0DP04 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
IGHV3-43DP0DP04 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
IGHV3-43DP0DP04 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.86□□□□□ -0.19
IGHV3-43DP0DP04 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
IGHV3-43DP0DP04 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
IGHV3-43DP0DP04 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC13.86□□□□□ -0.19
IGHV3-43DP0DP04 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC13.86□□□□□ -0.19
IGHV3-43DP0DP04 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC13.86□□□□□ -0.19
IGHV3-43DP0DP04 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms