Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
CXCL1P09341 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CXCL1P09341 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC12.95□□□□□ -0.34
CXCL1P09341 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
CXCL1P09341 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CXCL1P09341 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
CXCL1P09341 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CXCL1P09341 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CXCL1P09341 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC12.95□□□□□ -0.34
CXCL1P09341 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CXCL1P09341 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CXCL1P09341 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CXCL1P09341 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CXCL1P09341 AP000523.1-201ENST00000398242 1049 ntBASIC12.95□□□□□ -0.34
CXCL1P09341 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC12.95□□□□□ -0.34
CXCL1P09341 UBE2SP1-201ENST00000450587 669 ntBASIC12.95□□□□□ -0.34
CXCL1P09341 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC12.95□□□□□ -0.34
CXCL1P09341 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC12.95□□□□□ -0.34
CXCL1P09341 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC12.95□□□□□ -0.34
CXCL1P09341 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC12.95□□□□□ -0.34
CXCL1P09341 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CXCL1P09341 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC12.95□□□□□ -0.34
CXCL1P09341 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC12.95□□□□□ -0.34
CXCL1P09341 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CXCL1P09341 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CXCL1P09341 CICP20-201ENST00000443330 2801 ntBASIC12.95□□□□□ -0.34
CXCL1P09341 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CXCL1P09341 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
CXCL1P09341 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CXCL1P09341 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CXCL1P09341 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CXCL1P09341 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CXCL1P09341 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CXCL1P09341 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CXCL1P09341 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CXCL1P09341 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
CXCL1P09341 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
CXCL1P09341 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CXCL1P09341 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC12.95□□□□□ -0.34
CXCL1P09341 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
CXCL1P09341 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
CXCL1P09341 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CXCL1P09341 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CXCL1P09341 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CXCL1P09341 ACE-204ENST00000428043 5120 ntTSL 2 BASIC12.94□□□□□ -0.34
CXCL1P09341 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CXCL1P09341 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC12.94□□□□□ -0.34
CXCL1P09341 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CXCL1P09341 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
CXCL1P09341 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CXCL1P09341 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CXCL1P09341 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CXCL1P09341 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CXCL1P09341 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC12.94□□□□□ -0.34
CXCL1P09341 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CXCL1P09341 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CXCL1P09341 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CXCL1P09341 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CXCL1P09341 TSPY14P-201ENST00000303979 915 ntBASIC12.94□□□□□ -0.34
CXCL1P09341 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC12.94□□□□□ -0.34
CXCL1P09341 HES2-202ENST00000377836 507 ntTSL 2 BASIC12.94□□□□□ -0.34
CXCL1P09341 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CXCL1P09341 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CXCL1P09341 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC12.94□□□□□ -0.34
CXCL1P09341 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC12.94□□□□□ -0.34
CXCL1P09341 RBM17P1-201ENST00000453646 1190 ntBASIC12.94□□□□□ -0.34
CXCL1P09341 AC002558.1-201ENST00000488906 803 ntBASIC12.94□□□□□ -0.34
CXCL1P09341 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CXCL1P09341 AC024243.1-201ENST00000609234 778 ntBASIC12.94□□□□□ -0.34
CXCL1P09341 AC092666.2-201ENST00000613287 246 ntBASIC12.94□□□□□ -0.34
CXCL1P09341 AC009154.2-201ENST00000621177 724 ntBASIC12.94□□□□□ -0.34
CXCL1P09341 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CXCL1P09341 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CXCL1P09341 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC12.94□□□□□ -0.34
CXCL1P09341 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC12.94□□□□□ -0.34
CXCL1P09341 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CXCL1P09341 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.94□□□□□ -0.34
CXCL1P09341 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC12.94□□□□□ -0.34
CXCL1P09341 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CXCL1P09341 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CXCL1P09341 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CXCL1P09341 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CXCL1P09341 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CXCL1P09341 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CXCL1P09341 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CXCL1P09341 AC126755.1-201ENST00000525846 6405 ntBASIC12.94□□□□□ -0.34
CXCL1P09341 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC12.94□□□□□ -0.34
CXCL1P09341 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CXCL1P09341 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CXCL1P09341 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CXCL1P09341 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CXCL1P09341 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CXCL1P09341 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CXCL1P09341 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CXCL1P09341 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
CXCL1P09341 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CXCL1P09341 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CXCL1P09341 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CXCL1P09341 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CXCL1P09341 LINC01101-201ENST00000622953 1884 ntBASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms