Protein–RNA interactions for Protein: O95407

TNFRSF6B, Tumor necrosis factor receptor superfamily member 6B, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF6BO95407 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TNFRSF6BO95407 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC12.15□□□□□ -0.46
TNFRSF6BO95407 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TNFRSF6BO95407 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TNFRSF6BO95407 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC12.15□□□□□ -0.46
TNFRSF6BO95407 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
TNFRSF6BO95407 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TNFRSF6BO95407 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC12.15□□□□□ -0.46
TNFRSF6BO95407 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TNFRSF6BO95407 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TNFRSF6BO95407 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TNFRSF6BO95407 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
TNFRSF6BO95407 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TNFRSF6BO95407 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TNFRSF6BO95407 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TNFRSF6BO95407 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TNFRSF6BO95407 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TNFRSF6BO95407 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
TNFRSF6BO95407 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
TNFRSF6BO95407 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC12.15□□□□□ -0.46
TNFRSF6BO95407 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
TNFRSF6BO95407 SRP19-202ENST00000445150 833 ntTSL 2 BASIC12.15□□□□□ -0.46
TNFRSF6BO95407 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC12.15□□□□□ -0.46
TNFRSF6BO95407 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
TNFRSF6BO95407 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC12.15□□□□□ -0.46
TNFRSF6BO95407 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC12.15□□□□□ -0.46
TNFRSF6BO95407 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
TNFRSF6BO95407 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC12.15□□□□□ -0.46
TNFRSF6BO95407 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC12.15□□□□□ -0.46
TNFRSF6BO95407 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC12.15□□□□□ -0.46
TNFRSF6BO95407 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC12.15□□□□□ -0.46
TNFRSF6BO95407 GPR32P1-201ENST00000601788 811 ntBASIC12.15□□□□□ -0.46
TNFRSF6BO95407 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC12.15□□□□□ -0.46
TNFRSF6BO95407 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC12.15□□□□□ -0.46
TNFRSF6BO95407 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TNFRSF6BO95407 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
TNFRSF6BO95407 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TNFRSF6BO95407 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TNFRSF6BO95407 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC12.15□□□□□ -0.46
TNFRSF6BO95407 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC12.15□□□□□ -0.46
TNFRSF6BO95407 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
TNFRSF6BO95407 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
TNFRSF6BO95407 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TNFRSF6BO95407 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TNFRSF6BO95407 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TNFRSF6BO95407 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TNFRSF6BO95407 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.47
TNFRSF6BO95407 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
TNFRSF6BO95407 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
TNFRSF6BO95407 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
TNFRSF6BO95407 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.15□□□□□ -0.47
TNFRSF6BO95407 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
TNFRSF6BO95407 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
TNFRSF6BO95407 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TNFRSF6BO95407 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TNFRSF6BO95407 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TNFRSF6BO95407 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TNFRSF6BO95407 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TNFRSF6BO95407 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC12.14□□□□□ -0.47
TNFRSF6BO95407 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
TNFRSF6BO95407 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TNFRSF6BO95407 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
TNFRSF6BO95407 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TNFRSF6BO95407 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
TNFRSF6BO95407 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
TNFRSF6BO95407 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.14□□□□□ -0.47
TNFRSF6BO95407 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
TNFRSF6BO95407 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
TNFRSF6BO95407 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
TNFRSF6BO95407 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TNFRSF6BO95407 FAM8A6P-201ENST00000407496 1135 ntBASIC12.14□□□□□ -0.47
TNFRSF6BO95407 ECEL1P3-201ENST00000427961 737 ntBASIC12.14□□□□□ -0.47
TNFRSF6BO95407 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC12.14□□□□□ -0.47
TNFRSF6BO95407 HLA-F-220ENST00000434407 884 ntBASIC12.14□□□□□ -0.47
TNFRSF6BO95407 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC12.14□□□□□ -0.47
TNFRSF6BO95407 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC12.14□□□□□ -0.47
TNFRSF6BO95407 ZNF444P1-201ENST00000559497 298 ntBASIC12.14□□□□□ -0.47
TNFRSF6BO95407 MIR4651-201ENST00000582622 73 ntBASIC12.14□□□□□ -0.47
TNFRSF6BO95407 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC12.14□□□□□ -0.47
TNFRSF6BO95407 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC12.14□□□□□ -0.47
TNFRSF6BO95407 AC073912.3-201ENST00000624414 853 ntBASIC12.14□□□□□ -0.47
TNFRSF6BO95407 AL139011.1-202ENST00000642063 584 ntBASIC12.14□□□□□ -0.47
TNFRSF6BO95407 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TNFRSF6BO95407 PRAL-201ENST00000624952 3286 ntBASIC12.14□□□□□ -0.47
TNFRSF6BO95407 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
TNFRSF6BO95407 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TNFRSF6BO95407 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TNFRSF6BO95407 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC12.14□□□□□ -0.47
TNFRSF6BO95407 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC12.14□□□□□ -0.47
TNFRSF6BO95407 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
TNFRSF6BO95407 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC12.14□□□□□ -0.47
TNFRSF6BO95407 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
TNFRSF6BO95407 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TNFRSF6BO95407 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
TNFRSF6BO95407 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
TNFRSF6BO95407 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TNFRSF6BO95407 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC12.13□□□□□ -0.47
TNFRSF6BO95407 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TNFRSF6BO95407 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC12.13□□□□□ -0.47
TNFRSF6BO95407 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms