Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.41■□□□□ 0.38
BEST1O76090 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
BEST1O76090 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
BEST1O76090 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
BEST1O76090 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.41■□□□□ 0.38
BEST1O76090 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
BEST1O76090 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
BEST1O76090 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.41■□□□□ 0.38
BEST1O76090 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BEST1O76090 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.41■□□□□ 0.38
BEST1O76090 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.41■□□□□ 0.38
BEST1O76090 AC073389.1-201ENST00000595595 795 ntBASIC17.41■□□□□ 0.38
BEST1O76090 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.41■□□□□ 0.38
BEST1O76090 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.41■□□□□ 0.38
BEST1O76090 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
BEST1O76090 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
BEST1O76090 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.41■□□□□ 0.38
BEST1O76090 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BEST1O76090 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BEST1O76090 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
BEST1O76090 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
BEST1O76090 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BEST1O76090 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.41■□□□□ 0.38
BEST1O76090 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BEST1O76090 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BEST1O76090 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BEST1O76090 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BEST1O76090 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
BEST1O76090 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
BEST1O76090 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BEST1O76090 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BEST1O76090 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.4■□□□□ 0.38
BEST1O76090 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.4■□□□□ 0.38
BEST1O76090 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BEST1O76090 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
BEST1O76090 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.4■□□□□ 0.38
BEST1O76090 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BEST1O76090 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BEST1O76090 PCGF3-213ENST00000620529 1899 ntBASIC17.4■□□□□ 0.38
BEST1O76090 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
BEST1O76090 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BEST1O76090 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BEST1O76090 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BEST1O76090 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.4■□□□□ 0.38
BEST1O76090 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
BEST1O76090 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.4■□□□□ 0.38
BEST1O76090 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.4■□□□□ 0.38
BEST1O76090 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.4■□□□□ 0.38
BEST1O76090 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BEST1O76090 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.4■□□□□ 0.38
BEST1O76090 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.4■□□□□ 0.38
BEST1O76090 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.4■□□□□ 0.38
BEST1O76090 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
BEST1O76090 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.4■□□□□ 0.38
BEST1O76090 PRYP6-201ENST00000514804 343 ntBASIC17.4■□□□□ 0.38
BEST1O76090 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
BEST1O76090 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BEST1O76090 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.4■□□□□ 0.38
BEST1O76090 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.4■□□□□ 0.38
BEST1O76090 AC093028.1-201ENST00000622998 982 ntBASIC17.4■□□□□ 0.38
BEST1O76090 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.4■□□□□ 0.38
BEST1O76090 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.4■□□□□ 0.38
BEST1O76090 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.4■□□□□ 0.38
BEST1O76090 PRORSD1P-202ENST00000563365 2154 ntBASIC17.4■□□□□ 0.38
BEST1O76090 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BEST1O76090 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.4■□□□□ 0.38
BEST1O76090 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
BEST1O76090 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.4■□□□□ 0.38
BEST1O76090 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
BEST1O76090 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BEST1O76090 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
BEST1O76090 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.39■□□□□ 0.38
BEST1O76090 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
BEST1O76090 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.39■□□□□ 0.38
BEST1O76090 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.39■□□□□ 0.37
BEST1O76090 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BEST1O76090 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
BEST1O76090 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.39■□□□□ 0.37
BEST1O76090 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BEST1O76090 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
BEST1O76090 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BEST1O76090 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BEST1O76090 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BEST1O76090 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BEST1O76090 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BEST1O76090 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BEST1O76090 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.39■□□□□ 0.37
BEST1O76090 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.39■□□□□ 0.37
BEST1O76090 RBPMS2P1-201ENST00000437762 623 ntBASIC17.39■□□□□ 0.37
BEST1O76090 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.39■□□□□ 0.37
BEST1O76090 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.39■□□□□ 0.37
BEST1O76090 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.39■□□□□ 0.37
BEST1O76090 LINC00628-201ENST00000628516 1289 ntBASIC17.39■□□□□ 0.37
BEST1O76090 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.39■□□□□ 0.37
BEST1O76090 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
BEST1O76090 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.39■□□□□ 0.37
BEST1O76090 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BEST1O76090 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
BEST1O76090 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
BEST1O76090 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms