Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
GFRA3O60609 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC15.96■□□□□ 0.15
GFRA3O60609 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.14
GFRA3O60609 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
GFRA3O60609 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.96■□□□□ 0.14
GFRA3O60609 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
GFRA3O60609 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
GFRA3O60609 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC15.96■□□□□ 0.14
GFRA3O60609 AP000974.1-201ENST00000623909 2387 ntBASIC15.95■□□□□ 0.14
GFRA3O60609 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
GFRA3O60609 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
GFRA3O60609 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GFRA3O60609 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
GFRA3O60609 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
GFRA3O60609 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GFRA3O60609 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.95■□□□□ 0.14
GFRA3O60609 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GFRA3O60609 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GFRA3O60609 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GFRA3O60609 BAATP1-201ENST00000412284 1225 ntBASIC15.95■□□□□ 0.14
GFRA3O60609 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC15.95■□□□□ 0.14
GFRA3O60609 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC15.95■□□□□ 0.14
GFRA3O60609 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.95■□□□□ 0.14
GFRA3O60609 AC104784.1-201ENST00000473096 294 ntBASIC15.95■□□□□ 0.14
GFRA3O60609 IQSEC3P1-201ENST00000538799 536 ntBASIC15.95■□□□□ 0.14
GFRA3O60609 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
GFRA3O60609 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
GFRA3O60609 AC108359.1-201ENST00000616451 1211 ntBASIC15.95■□□□□ 0.14
GFRA3O60609 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GFRA3O60609 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
GFRA3O60609 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
GFRA3O60609 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GFRA3O60609 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GFRA3O60609 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
GFRA3O60609 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.95■□□□□ 0.14
GFRA3O60609 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
GFRA3O60609 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
GFRA3O60609 AHCYP2-201ENST00000430630 1300 ntBASIC15.94■□□□□ 0.14
GFRA3O60609 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
GFRA3O60609 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
GFRA3O60609 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
GFRA3O60609 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
GFRA3O60609 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.94■□□□□ 0.14
GFRA3O60609 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
GFRA3O60609 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
GFRA3O60609 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
GFRA3O60609 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.94■□□□□ 0.14
GFRA3O60609 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
GFRA3O60609 LST1-205ENST00000376089 680 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
GFRA3O60609 LST1-206ENST00000376090 689 ntTSL 2 BASIC15.94■□□□□ 0.14
GFRA3O60609 LST1-208ENST00000376093 648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
GFRA3O60609 LST1-209ENST00000376096 565 ntTSL 2 BASIC15.94■□□□□ 0.14
GFRA3O60609 LST1-210ENST00000376099 610 ntTSL 2 BASIC15.94■□□□□ 0.14
GFRA3O60609 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
GFRA3O60609 LST1-212ENST00000396101 459 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
GFRA3O60609 SOCS2P1-201ENST00000417727 557 ntBASIC15.94■□□□□ 0.14
GFRA3O60609 LST1-214ENST00000418507 726 ntTSL 2 BASIC15.94■□□□□ 0.14
GFRA3O60609 LST1-217ENST00000438075 764 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
GFRA3O60609 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
GFRA3O60609 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
GFRA3O60609 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.94■□□□□ 0.14
GFRA3O60609 AC009486.1-201ENST00000569860 813 ntBASIC15.94■□□□□ 0.14
GFRA3O60609 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.94■□□□□ 0.14
GFRA3O60609 AC104982.3-201ENST00000581995 514 ntBASIC15.94■□□□□ 0.14
GFRA3O60609 AC024267.1-201ENST00000582320 895 ntBASIC15.94■□□□□ 0.14
GFRA3O60609 AC026790.2-201ENST00000606282 430 ntBASIC15.94■□□□□ 0.14
GFRA3O60609 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC15.94■□□□□ 0.14
GFRA3O60609 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.94■□□□□ 0.14
GFRA3O60609 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
GFRA3O60609 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
GFRA3O60609 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
GFRA3O60609 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
GFRA3O60609 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC15.94■□□□□ 0.14
GFRA3O60609 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC15.94■□□□□ 0.14
GFRA3O60609 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
GFRA3O60609 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC15.94■□□□□ 0.14
GFRA3O60609 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
GFRA3O60609 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC15.94■□□□□ 0.14
GFRA3O60609 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
GFRA3O60609 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
GFRA3O60609 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
GFRA3O60609 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
GFRA3O60609 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
GFRA3O60609 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
GFRA3O60609 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
GFRA3O60609 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
GFRA3O60609 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.94■□□□□ 0.14
GFRA3O60609 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
GFRA3O60609 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
GFRA3O60609 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
GFRA3O60609 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
GFRA3O60609 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
GFRA3O60609 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
GFRA3O60609 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
GFRA3O60609 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
GFRA3O60609 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC15.93■□□□□ 0.14
GFRA3O60609 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
GFRA3O60609 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
GFRA3O60609 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.93■□□□□ 0.14
GFRA3O60609 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms