Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH17O14917 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH17O14917 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH17O14917 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDH17O14917 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH17O14917 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
PCDH17O14917 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.93■□□□□ 0.14
PCDH17O14917 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH17O14917 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDH17O14917 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.93■□□□□ 0.14
PCDH17O14917 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH17O14917 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDH17O14917 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH17O14917 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH17O14917 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
PCDH17O14917 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH17O14917 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH17O14917 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
PCDH17O14917 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH17O14917 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH17O14917 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH17O14917 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH17O14917 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.92■□□□□ 0.14
PCDH17O14917 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH17O14917 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH17O14917 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH17O14917 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.92■□□□□ 0.14
PCDH17O14917 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH17O14917 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.92■□□□□ 0.14
PCDH17O14917 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH17O14917 SLC25A6P2-201ENST00000497974 877 ntBASIC15.92■□□□□ 0.14
PCDH17O14917 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH17O14917 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH17O14917 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.92■□□□□ 0.14
PCDH17O14917 AC124947.2-201ENST00000547118 1133 ntBASIC15.92■□□□□ 0.14
PCDH17O14917 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.92■□□□□ 0.14
PCDH17O14917 AC018845.2-201ENST00000568326 409 ntBASIC15.92■□□□□ 0.14
PCDH17O14917 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.92■□□□□ 0.14
PCDH17O14917 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.92■□□□□ 0.14
PCDH17O14917 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.92■□□□□ 0.14
PCDH17O14917 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH17O14917 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
PCDH17O14917 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH17O14917 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH17O14917 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH17O14917 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH17O14917 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
PCDH17O14917 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH17O14917 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
PCDH17O14917 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.92■□□□□ 0.14
PCDH17O14917 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH17O14917 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH17O14917 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.92■□□□□ 0.14
PCDH17O14917 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.92■□□□□ 0.14
PCDH17O14917 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.92■□□□□ 0.14
PCDH17O14917 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.92■□□□□ 0.14
PCDH17O14917 AC006449.5-201ENST00000610658 2098 ntBASIC15.91■□□□□ 0.14
PCDH17O14917 AL662844.4-201ENST00000606367 2838 ntBASIC15.91■□□□□ 0.14
PCDH17O14917 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.91■□□□□ 0.14
PCDH17O14917 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH17O14917 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH17O14917 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH17O14917 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH17O14917 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.91■□□□□ 0.14
PCDH17O14917 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.91■□□□□ 0.14
PCDH17O14917 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH17O14917 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH17O14917 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH17O14917 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH17O14917 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH17O14917 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH17O14917 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH17O14917 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH17O14917 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.91■□□□□ 0.14
PCDH17O14917 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
PCDH17O14917 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.91■□□□□ 0.14
PCDH17O14917 HMGN1P19-201ENST00000436976 333 ntBASIC15.91■□□□□ 0.14
PCDH17O14917 AL513480.1-201ENST00000451731 511 ntBASIC15.91■□□□□ 0.14
PCDH17O14917 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.91■□□□□ 0.14
PCDH17O14917 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.91■□□□□ 0.14
PCDH17O14917 AL355385.1-201ENST00000606123 409 ntBASIC15.91■□□□□ 0.14
PCDH17O14917 ACTL9-202ENST00000612068 1252 ntBASIC15.91■□□□□ 0.14
PCDH17O14917 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.91■□□□□ 0.14
PCDH17O14917 AC092865.6-201ENST00000642101 219 ntBASIC15.91■□□□□ 0.14
PCDH17O14917 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
PCDH17O14917 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDH17O14917 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.91■□□□□ 0.14
PCDH17O14917 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH17O14917 AC025580.3-201ENST00000617932 1424 ntBASIC15.91■□□□□ 0.14
PCDH17O14917 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH17O14917 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
PCDH17O14917 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDH17O14917 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDH17O14917 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH17O14917 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDH17O14917 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH17O14917 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDH17O14917 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH17O14917 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH17O14917 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms