Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
O00370 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.75■□□□□ 0.43
O00370 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
O00370 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
O00370 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.75■□□□□ 0.43
O00370 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
O00370 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.75■□□□□ 0.43
O00370 RNU1-129P-201ENST00000384064 167 ntBASIC17.75■□□□□ 0.43
O00370 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
O00370 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.75■□□□□ 0.43
O00370 U1.21-201ENST00000580816 167 ntBASIC17.75■□□□□ 0.43
O00370 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.75■□□□□ 0.43
O00370 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.75■□□□□ 0.43
O00370 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
O00370 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
O00370 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.75■□□□□ 0.43
O00370 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.75■□□□□ 0.43
O00370 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
O00370 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
O00370 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
O00370 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
O00370 AL512652.2-201ENST00000625156 1716 ntBASIC17.75■□□□□ 0.43
O00370 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
O00370 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
O00370 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
O00370 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.74■□□□□ 0.43
O00370 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
O00370 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
O00370 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
O00370 ALOX12P2-203ENST00000570921 1945 ntBASIC17.74■□□□□ 0.43
O00370 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
O00370 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.74■□□□□ 0.43
O00370 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
O00370 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
O00370 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.74■□□□□ 0.43
O00370 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
O00370 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
O00370 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.74■□□□□ 0.43
O00370 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
O00370 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
O00370 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
O00370 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
O00370 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
O00370 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
O00370 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.74■□□□□ 0.43
O00370 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.74■□□□□ 0.43
O00370 AC023274.1-201ENST00000418278 595 ntBASIC17.74■□□□□ 0.43
O00370 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.74■□□□□ 0.43
O00370 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
O00370 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
O00370 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.74■□□□□ 0.43
O00370 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
O00370 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.74■□□□□ 0.43
O00370 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.74■□□□□ 0.43
O00370 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.74■□□□□ 0.43
O00370 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
O00370 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
O00370 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
O00370 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
O00370 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
O00370 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
O00370 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
O00370 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
O00370 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
O00370 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.74■□□□□ 0.43
O00370 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
O00370 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
O00370 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
O00370 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
O00370 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.74■□□□□ 0.43
O00370 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.74■□□□□ 0.43
O00370 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
O00370 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.74■□□□□ 0.43
O00370 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
O00370 PMS2P7-201ENST00000506558 1336 ntBASIC17.73■□□□□ 0.43
O00370 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.73■□□□□ 0.43
O00370 PCDHA1-201ENST00000378133 2726 ntBASIC17.73■□□□□ 0.43
O00370 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
O00370 AC092919.2-201ENST00000623631 1645 ntBASIC17.73■□□□□ 0.43
O00370 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
O00370 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
O00370 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
O00370 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.73■□□□□ 0.43
O00370 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.73■□□□□ 0.43
O00370 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.73■□□□□ 0.43
O00370 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
O00370 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.73■□□□□ 0.43
O00370 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
O00370 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.73■□□□□ 0.43
O00370 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.73■□□□□ 0.43
O00370 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.73■□□□□ 0.43
O00370 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.73■□□□□ 0.43
O00370 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.73■□□□□ 0.43
O00370 AC040169.1-201ENST00000565382 521 ntBASIC17.73■□□□□ 0.43
O00370 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
O00370 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.73■□□□□ 0.43
O00370 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
O00370 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
O00370 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
O00370 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms