Protein–RNA interactions for Protein: O00305

CACNB4, Voltage-dependent L-type calcium channel subunit beta-4, humanhuman

Predicted RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4O00305 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CACNB4O00305 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CACNB4O00305 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CACNB4O00305 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.42■□□□□ 0.22
CACNB4O00305 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.42■□□□□ 0.22
CACNB4O00305 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CACNB4O00305 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.42■□□□□ 0.22
CACNB4O00305 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CACNB4O00305 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.42■□□□□ 0.22
CACNB4O00305 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CACNB4O00305 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CACNB4O00305 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.42■□□□□ 0.22
CACNB4O00305 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CACNB4O00305 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
CACNB4O00305 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CACNB4O00305 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CACNB4O00305 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CACNB4O00305 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CACNB4O00305 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CACNB4O00305 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.42■□□□□ 0.22
CACNB4O00305 AC080080.1-201ENST00000625121 2420 ntBASIC16.41■□□□□ 0.22
CACNB4O00305 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CACNB4O00305 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CACNB4O00305 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CACNB4O00305 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CACNB4O00305 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CACNB4O00305 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
CACNB4O00305 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CACNB4O00305 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CACNB4O00305 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.41■□□□□ 0.22
CACNB4O00305 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CACNB4O00305 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CACNB4O00305 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CACNB4O00305 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.41■□□□□ 0.22
CACNB4O00305 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.41■□□□□ 0.22
CACNB4O00305 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.41■□□□□ 0.22
CACNB4O00305 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.41■□□□□ 0.22
CACNB4O00305 AC067863.1-201ENST00000494933 530 ntBASIC16.41■□□□□ 0.22
CACNB4O00305 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.41■□□□□ 0.22
CACNB4O00305 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CACNB4O00305 AP000842.3-202ENST00000569238 1080 ntBASIC16.41■□□□□ 0.22
CACNB4O00305 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.41■□□□□ 0.22
CACNB4O00305 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.41■□□□□ 0.22
CACNB4O00305 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CACNB4O00305 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.41■□□□□ 0.22
CACNB4O00305 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CACNB4O00305 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CACNB4O00305 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.41■□□□□ 0.22
CACNB4O00305 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CACNB4O00305 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CACNB4O00305 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
CACNB4O00305 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CACNB4O00305 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
CACNB4O00305 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.41■□□□□ 0.22
CACNB4O00305 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.41■□□□□ 0.22
CACNB4O00305 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CACNB4O00305 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
CACNB4O00305 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CACNB4O00305 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.41■□□□□ 0.22
CACNB4O00305 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CACNB4O00305 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CACNB4O00305 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.4■□□□□ 0.22
CACNB4O00305 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CACNB4O00305 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CACNB4O00305 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.4■□□□□ 0.22
CACNB4O00305 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.4■□□□□ 0.22
CACNB4O00305 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CACNB4O00305 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.4■□□□□ 0.22
CACNB4O00305 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CACNB4O00305 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CACNB4O00305 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CACNB4O00305 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CACNB4O00305 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CACNB4O00305 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.4■□□□□ 0.22
CACNB4O00305 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CACNB4O00305 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
CACNB4O00305 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CACNB4O00305 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CACNB4O00305 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
CACNB4O00305 CNN2P2-201ENST00000443536 909 ntBASIC16.4■□□□□ 0.22
CACNB4O00305 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.4■□□□□ 0.22
CACNB4O00305 CNN2P3-201ENST00000450201 906 ntBASIC16.4■□□□□ 0.22
CACNB4O00305 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.4■□□□□ 0.22
CACNB4O00305 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.4■□□□□ 0.22
CACNB4O00305 AC105233.2-201ENST00000523697 349 ntBASIC16.4■□□□□ 0.22
CACNB4O00305 AF228730.5-201ENST00000530288 346 ntBASIC16.4■□□□□ 0.22
CACNB4O00305 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CACNB4O00305 SLC25A39P2-201ENST00000537614 270 ntBASIC16.4■□□□□ 0.22
CACNB4O00305 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CACNB4O00305 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.4■□□□□ 0.22
CACNB4O00305 AL136317.3-201ENST00000618497 906 ntBASIC16.4■□□□□ 0.22
CACNB4O00305 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.4■□□□□ 0.22
CACNB4O00305 AC084121.4-201ENST00000641598 221 ntBASIC16.4■□□□□ 0.22
CACNB4O00305 AF228730.8-201ENST00000642140 221 ntBASIC16.4■□□□□ 0.22
CACNB4O00305 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CACNB4O00305 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.4■□□□□ 0.22
CACNB4O00305 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.4■□□□□ 0.22
CACNB4O00305 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CACNB4O00305 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
CACNB4O00305 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms