Protein–RNA interactions for Protein: A8MV65

VGLL3, Transcription cofactor vestigial-like protein 3, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3A8MV65 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
VGLL3A8MV65 INO80E-214ENST00000620599 515 ntTSL 2 BASIC16.36■□□□□ 0.21
VGLL3A8MV65 ALOX12P2-203ENST00000570921 1945 ntBASIC16.36■□□□□ 0.21
VGLL3A8MV65 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
VGLL3A8MV65 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VGLL3A8MV65 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.36■□□□□ 0.21
VGLL3A8MV65 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16.36■□□□□ 0.21
VGLL3A8MV65 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VGLL3A8MV65 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VGLL3A8MV65 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
VGLL3A8MV65 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VGLL3A8MV65 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VGLL3A8MV65 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
VGLL3A8MV65 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC16.36■□□□□ 0.21
VGLL3A8MV65 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC16.36■□□□□ 0.21
VGLL3A8MV65 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
VGLL3A8MV65 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VGLL3A8MV65 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VGLL3A8MV65 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
VGLL3A8MV65 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC16.36■□□□□ 0.21
VGLL3A8MV65 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC16.35■□□□□ 0.21
VGLL3A8MV65 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VGLL3A8MV65 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
VGLL3A8MV65 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VGLL3A8MV65 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VGLL3A8MV65 MTHFR-217ENST00000641820 1569 ntBASIC16.35■□□□□ 0.21
VGLL3A8MV65 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VGLL3A8MV65 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
VGLL3A8MV65 AL390755.1-201ENST00000623716 2027 ntBASIC16.35■□□□□ 0.21
VGLL3A8MV65 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VGLL3A8MV65 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VGLL3A8MV65 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
VGLL3A8MV65 GPAT2P1-201ENST00000444924 1672 ntBASIC16.35■□□□□ 0.21
VGLL3A8MV65 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC16.35■□□□□ 0.21
VGLL3A8MV65 DENND3-221ENST00000523308 2959 ntTSL 2 BASIC16.35■□□□□ 0.21
VGLL3A8MV65 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VGLL3A8MV65 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.35■□□□□ 0.21
VGLL3A8MV65 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.35■□□□□ 0.21
VGLL3A8MV65 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.35■□□□□ 0.21
VGLL3A8MV65 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VGLL3A8MV65 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.35■□□□□ 0.21
VGLL3A8MV65 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VGLL3A8MV65 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC16.35■□□□□ 0.21
VGLL3A8MV65 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
VGLL3A8MV65 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VGLL3A8MV65 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VGLL3A8MV65 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
VGLL3A8MV65 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.34■□□□□ 0.21
VGLL3A8MV65 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
VGLL3A8MV65 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
VGLL3A8MV65 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VGLL3A8MV65 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VGLL3A8MV65 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VGLL3A8MV65 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VGLL3A8MV65 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC16.34■□□□□ 0.21
VGLL3A8MV65 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VGLL3A8MV65 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
VGLL3A8MV65 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VGLL3A8MV65 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VGLL3A8MV65 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VGLL3A8MV65 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
VGLL3A8MV65 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
VGLL3A8MV65 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
VGLL3A8MV65 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
VGLL3A8MV65 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
VGLL3A8MV65 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VGLL3A8MV65 ABHD17AP1-201ENST00000358206 933 ntBASIC16.34■□□□□ 0.21
VGLL3A8MV65 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
VGLL3A8MV65 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VGLL3A8MV65 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC16.34■□□□□ 0.21
VGLL3A8MV65 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.34■□□□□ 0.21
VGLL3A8MV65 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VGLL3A8MV65 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC16.34■□□□□ 0.21
VGLL3A8MV65 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VGLL3A8MV65 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VGLL3A8MV65 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC16.34■□□□□ 0.21
VGLL3A8MV65 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
VGLL3A8MV65 CRK-204ENST00000574295 1391 ntTSL 5 BASIC16.34■□□□□ 0.21
VGLL3A8MV65 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
VGLL3A8MV65 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.34■□□□□ 0.21
VGLL3A8MV65 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
VGLL3A8MV65 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VGLL3A8MV65 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.34■□□□□ 0.21
VGLL3A8MV65 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
VGLL3A8MV65 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC16.34■□□□□ 0.21
VGLL3A8MV65 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VGLL3A8MV65 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VGLL3A8MV65 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VGLL3A8MV65 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.34■□□□□ 0.21
VGLL3A8MV65 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VGLL3A8MV65 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.34■□□□□ 0.21
VGLL3A8MV65 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VGLL3A8MV65 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VGLL3A8MV65 TNN-202ENST00000621086 4234 ntTSL 5 BASIC16.34■□□□□ 0.21
VGLL3A8MV65 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.33■□□□□ 0.21
VGLL3A8MV65 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
VGLL3A8MV65 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
VGLL3A8MV65 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.33■□□□□ 0.21
VGLL3A8MV65 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.33■□□□□ 0.21
VGLL3A8MV65 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC16.33■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms