Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TMEM235A6NFC5 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TMEM235A6NFC5 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.12
TMEM235A6NFC5 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
TMEM235A6NFC5 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TMEM235A6NFC5 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.27□□□□□ -0.12
TMEM235A6NFC5 AC097637.2-201ENST00000624096 1997 ntBASIC14.27□□□□□ -0.12
TMEM235A6NFC5 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
TMEM235A6NFC5 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
TMEM235A6NFC5 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TMEM235A6NFC5 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TMEM235A6NFC5 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TMEM235A6NFC5 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
TMEM235A6NFC5 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TMEM235A6NFC5 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
TMEM235A6NFC5 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TMEM235A6NFC5 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TMEM235A6NFC5 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
TMEM235A6NFC5 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
TMEM235A6NFC5 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM235A6NFC5 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM235A6NFC5 AC005521.1-201ENST00000393351 872 ntBASIC14.27□□□□□ -0.13
TMEM235A6NFC5 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC14.27□□□□□ -0.13
TMEM235A6NFC5 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC14.27□□□□□ -0.13
TMEM235A6NFC5 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM235A6NFC5 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM235A6NFC5 VENTXP7-201ENST00000475503 772 ntBASIC14.27□□□□□ -0.13
TMEM235A6NFC5 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC14.27□□□□□ -0.13
TMEM235A6NFC5 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.13
TMEM235A6NFC5 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.27□□□□□ -0.13
TMEM235A6NFC5 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC14.27□□□□□ -0.13
TMEM235A6NFC5 AC133561.5-201ENST00000635547 218 ntBASIC14.27□□□□□ -0.13
TMEM235A6NFC5 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM235A6NFC5 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.13
TMEM235A6NFC5 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM235A6NFC5 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.27□□□□□ -0.13
TMEM235A6NFC5 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
TMEM235A6NFC5 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM235A6NFC5 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM235A6NFC5 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM235A6NFC5 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.27□□□□□ -0.13
TMEM235A6NFC5 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM235A6NFC5 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
TMEM235A6NFC5 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM235A6NFC5 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM235A6NFC5 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM235A6NFC5 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM235A6NFC5 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM235A6NFC5 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM235A6NFC5 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM235A6NFC5 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM235A6NFC5 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.26□□□□□ -0.13
TMEM235A6NFC5 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM235A6NFC5 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM235A6NFC5 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TMEM235A6NFC5 PMPCAP1-201ENST00000508114 1576 ntBASIC14.26□□□□□ -0.13
TMEM235A6NFC5 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM235A6NFC5 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM235A6NFC5 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM235A6NFC5 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM235A6NFC5 TP73-AS1-210ENST00000637775 1455 ntBASIC14.26□□□□□ -0.13
TMEM235A6NFC5 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM235A6NFC5 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM235A6NFC5 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM235A6NFC5 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM235A6NFC5 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM235A6NFC5 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM235A6NFC5 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM235A6NFC5 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.26□□□□□ -0.13
TMEM235A6NFC5 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM235A6NFC5 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM235A6NFC5 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM235A6NFC5 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC14.26□□□□□ -0.13
TMEM235A6NFC5 AL020989.1-201ENST00000422979 469 ntBASIC14.26□□□□□ -0.13
TMEM235A6NFC5 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.26□□□□□ -0.13
TMEM235A6NFC5 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC14.26□□□□□ -0.13
TMEM235A6NFC5 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
TMEM235A6NFC5 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC14.26□□□□□ -0.13
TMEM235A6NFC5 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.26□□□□□ -0.13
TMEM235A6NFC5 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC14.26□□□□□ -0.13
TMEM235A6NFC5 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM235A6NFC5 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM235A6NFC5 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
TMEM235A6NFC5 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM235A6NFC5 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM235A6NFC5 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM235A6NFC5 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
TMEM235A6NFC5 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
TMEM235A6NFC5 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM235A6NFC5 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM235A6NFC5 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM235A6NFC5 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TMEM235A6NFC5 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM235A6NFC5 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM235A6NFC5 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TMEM235A6NFC5 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM235A6NFC5 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TMEM235A6NFC5 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.26□□□□□ -0.13
TMEM235A6NFC5 AC004817.3-201ENST00000602957 2129 ntBASIC14.26□□□□□ -0.13
TMEM235A6NFC5 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms