Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 F11R-206ENST00000621309 4770 ntTSL 5 BASIC12.61□□□□□ -0.39
HLA-DRB4X5D2U9 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DRB4X5D2U9 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DRB4X5D2U9 BANP-201ENST00000286122 2368 ntTSL 5 BASIC12.61□□□□□ -0.39
HLA-DRB4X5D2U9 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DRB4X5D2U9 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DRB4X5D2U9 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DRB4X5D2U9 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC12.61□□□□□ -0.39
HLA-DRB4X5D2U9 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
HLA-DRB4X5D2U9 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
HLA-DRB4X5D2U9 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC12.61□□□□□ -0.39
HLA-DRB4X5D2U9 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC12.61□□□□□ -0.39
HLA-DRB4X5D2U9 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC12.61□□□□□ -0.39
HLA-DRB4X5D2U9 PPIE-208ENST00000470213 927 ntTSL 3 BASIC12.61□□□□□ -0.39
HLA-DRB4X5D2U9 MOK-208ENST00000519058 917 ntTSL 2 BASIC12.61□□□□□ -0.39
HLA-DRB4X5D2U9 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC12.61□□□□□ -0.39
HLA-DRB4X5D2U9 AL160237.2-201ENST00000556165 472 ntBASIC12.61□□□□□ -0.39
HLA-DRB4X5D2U9 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC12.61□□□□□ -0.39
HLA-DRB4X5D2U9 RPS29-206ENST00000557111 488 ntTSL 2 BASIC12.61□□□□□ -0.39
HLA-DRB4X5D2U9 DUX4L17-201ENST00000557360 1267 ntBASIC12.61□□□□□ -0.39
HLA-DRB4X5D2U9 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC12.61□□□□□ -0.39
HLA-DRB4X5D2U9 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC12.61□□□□□ -0.39
HLA-DRB4X5D2U9 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DRB4X5D2U9 GGTLC5P-201ENST00000617623 998 ntBASIC12.61□□□□□ -0.39
HLA-DRB4X5D2U9 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC12.61□□□□□ -0.39
HLA-DRB4X5D2U9 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC12.61□□□□□ -0.39
HLA-DRB4X5D2U9 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC12.61□□□□□ -0.39
HLA-DRB4X5D2U9 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DRB4X5D2U9 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DRB4X5D2U9 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DRB4X5D2U9 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DRB4X5D2U9 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
HLA-DRB4X5D2U9 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
HLA-DRB4X5D2U9 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DRB4X5D2U9 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC12.61□□□□□ -0.39
HLA-DRB4X5D2U9 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DRB4X5D2U9 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
HLA-DRB4X5D2U9 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DRB4X5D2U9 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC12.61□□□□□ -0.39
HLA-DRB4X5D2U9 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
HLA-DRB4X5D2U9 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DRB4X5D2U9 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DRB4X5D2U9 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DRB4X5D2U9 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
HLA-DRB4X5D2U9 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC12.6□□□□□ -0.39
HLA-DRB4X5D2U9 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DRB4X5D2U9 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DRB4X5D2U9 AC007950.2-201ENST00000615045 2347 ntBASIC12.6□□□□□ -0.39
HLA-DRB4X5D2U9 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DRB4X5D2U9 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DRB4X5D2U9 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC12.6□□□□□ -0.39
HLA-DRB4X5D2U9 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
HLA-DRB4X5D2U9 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DRB4X5D2U9 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DRB4X5D2U9 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DRB4X5D2U9 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC12.6□□□□□ -0.39
HLA-DRB4X5D2U9 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC12.6□□□□□ -0.39
HLA-DRB4X5D2U9 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC12.6□□□□□ -0.39
HLA-DRB4X5D2U9 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC12.6□□□□□ -0.39
HLA-DRB4X5D2U9 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DRB4X5D2U9 AC073621.1-201ENST00000392730 636 ntBASIC12.6□□□□□ -0.39
HLA-DRB4X5D2U9 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
HLA-DRB4X5D2U9 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC12.6□□□□□ -0.39
HLA-DRB4X5D2U9 HNRNPDP1-201ENST00000439535 754 ntBASIC12.6□□□□□ -0.39
HLA-DRB4X5D2U9 RPS15P9-201ENST00000494093 319 ntBASIC12.6□□□□□ -0.39
HLA-DRB4X5D2U9 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DRB4X5D2U9 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC12.6□□□□□ -0.39
HLA-DRB4X5D2U9 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC12.6□□□□□ -0.39
HLA-DRB4X5D2U9 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC12.6□□□□□ -0.39
HLA-DRB4X5D2U9 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC12.6□□□□□ -0.39
HLA-DRB4X5D2U9 AL356488.2-201ENST00000602755 427 ntBASIC12.6□□□□□ -0.39
HLA-DRB4X5D2U9 AC104692.2-201ENST00000603054 253 ntBASIC12.6□□□□□ -0.39
HLA-DRB4X5D2U9 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DRB4X5D2U9 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DRB4X5D2U9 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DRB4X5D2U9 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DRB4X5D2U9 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC12.6□□□□□ -0.39
HLA-DRB4X5D2U9 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DRB4X5D2U9 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC12.6□□□□□ -0.39
HLA-DRB4X5D2U9 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC12.6□□□□□ -0.39
HLA-DRB4X5D2U9 KRT8P49-201ENST00000604166 1432 ntBASIC12.6□□□□□ -0.39
HLA-DRB4X5D2U9 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC12.6□□□□□ -0.39
HLA-DRB4X5D2U9 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DRB4X5D2U9 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DRB4X5D2U9 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DRB4X5D2U9 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DRB4X5D2U9 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC12.6□□□□□ -0.39
HLA-DRB4X5D2U9 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
HLA-DRB4X5D2U9 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DRB4X5D2U9 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC12.59□□□□□ -0.39
HLA-DRB4X5D2U9 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DRB4X5D2U9 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DRB4X5D2U9 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DRB4X5D2U9 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DRB4X5D2U9 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DRB4X5D2U9 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC12.59□□□□□ -0.39
HLA-DRB4X5D2U9 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DRB4X5D2U9 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DRB4X5D2U9 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
HLA-DRB4X5D2U9 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms