Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC18.61■□□□□ 0.57
PTCH2Q9Y6C5 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTCH2Q9Y6C5 ELK2AP-201ENST00000392510 1007 ntBASIC18.61■□□□□ 0.57
PTCH2Q9Y6C5 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PTCH2Q9Y6C5 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PTCH2Q9Y6C5 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PTCH2Q9Y6C5 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC18.61■□□□□ 0.57
PTCH2Q9Y6C5 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PTCH2Q9Y6C5 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTCH2Q9Y6C5 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC18.61■□□□□ 0.57
PTCH2Q9Y6C5 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.61■□□□□ 0.57
PTCH2Q9Y6C5 PAM16-204ENST00000571941 674 ntTSL 3 BASIC18.61■□□□□ 0.57
PTCH2Q9Y6C5 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PTCH2Q9Y6C5 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.61■□□□□ 0.57
PTCH2Q9Y6C5 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTCH2Q9Y6C5 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTCH2Q9Y6C5 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTCH2Q9Y6C5 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTCH2Q9Y6C5 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
PTCH2Q9Y6C5 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTCH2Q9Y6C5 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.61■□□□□ 0.57
PTCH2Q9Y6C5 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.61■□□□□ 0.57
PTCH2Q9Y6C5 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.6■□□□□ 0.57
PTCH2Q9Y6C5 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.6■□□□□ 0.57
PTCH2Q9Y6C5 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.6■□□□□ 0.57
PTCH2Q9Y6C5 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PTCH2Q9Y6C5 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC18.6■□□□□ 0.57
PTCH2Q9Y6C5 AL021920.2-201ENST00000624828 1351 ntBASIC18.6■□□□□ 0.57
PTCH2Q9Y6C5 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PTCH2Q9Y6C5 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTCH2Q9Y6C5 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
PTCH2Q9Y6C5 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTCH2Q9Y6C5 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTCH2Q9Y6C5 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PTCH2Q9Y6C5 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PTCH2Q9Y6C5 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC18.6■□□□□ 0.57
PTCH2Q9Y6C5 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTCH2Q9Y6C5 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.6■□□□□ 0.57
PTCH2Q9Y6C5 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.6■□□□□ 0.57
PTCH2Q9Y6C5 AGER-214ENST00000538695 487 ntTSL 2 BASIC18.6■□□□□ 0.57
PTCH2Q9Y6C5 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTCH2Q9Y6C5 RRP7BP-205ENST00000566851 833 ntBASIC18.6■□□□□ 0.57
PTCH2Q9Y6C5 ARL16-210ENST00000574938 751 ntTSL 2 BASIC18.6■□□□□ 0.57
PTCH2Q9Y6C5 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC18.6■□□□□ 0.57
PTCH2Q9Y6C5 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC18.6■□□□□ 0.57
PTCH2Q9Y6C5 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.6■□□□□ 0.57
PTCH2Q9Y6C5 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PTCH2Q9Y6C5 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC18.6■□□□□ 0.57
PTCH2Q9Y6C5 AL139099.5-201ENST00000635274 300 ntBASIC18.6■□□□□ 0.57
PTCH2Q9Y6C5 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTCH2Q9Y6C5 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTCH2Q9Y6C5 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PTCH2Q9Y6C5 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.6■□□□□ 0.57
PTCH2Q9Y6C5 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTCH2Q9Y6C5 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PTCH2Q9Y6C5 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.59■□□□□ 0.57
PTCH2Q9Y6C5 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTCH2Q9Y6C5 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTCH2Q9Y6C5 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.59■□□□□ 0.57
PTCH2Q9Y6C5 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.59■□□□□ 0.57
PTCH2Q9Y6C5 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTCH2Q9Y6C5 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.59■□□□□ 0.57
PTCH2Q9Y6C5 RNF165-205ENST00000588679 2904 ntBASIC18.59■□□□□ 0.57
PTCH2Q9Y6C5 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTCH2Q9Y6C5 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.59■□□□□ 0.57
PTCH2Q9Y6C5 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.59■□□□□ 0.57
PTCH2Q9Y6C5 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.59■□□□□ 0.57
PTCH2Q9Y6C5 NSL1-201ENST00000366976 722 ntTSL 2 BASIC18.59■□□□□ 0.57
PTCH2Q9Y6C5 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC18.59■□□□□ 0.57
PTCH2Q9Y6C5 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PTCH2Q9Y6C5 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PTCH2Q9Y6C5 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
PTCH2Q9Y6C5 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.59■□□□□ 0.57
PTCH2Q9Y6C5 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC18.59■□□□□ 0.57
PTCH2Q9Y6C5 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PTCH2Q9Y6C5 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.59■□□□□ 0.57
PTCH2Q9Y6C5 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTCH2Q9Y6C5 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTCH2Q9Y6C5 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTCH2Q9Y6C5 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTCH2Q9Y6C5 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PTCH2Q9Y6C5 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PTCH2Q9Y6C5 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PTCH2Q9Y6C5 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC18.59■□□□□ 0.57
PTCH2Q9Y6C5 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PTCH2Q9Y6C5 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.59■□□□□ 0.57
PTCH2Q9Y6C5 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PTCH2Q9Y6C5 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.59■□□□□ 0.57
PTCH2Q9Y6C5 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC18.58■□□□□ 0.57
PTCH2Q9Y6C5 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PTCH2Q9Y6C5 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.58■□□□□ 0.57
PTCH2Q9Y6C5 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PTCH2Q9Y6C5 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PTCH2Q9Y6C5 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
PTCH2Q9Y6C5 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PTCH2Q9Y6C5 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PTCH2Q9Y6C5 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PTCH2Q9Y6C5 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PTCH2Q9Y6C5 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.58■□□□□ 0.57
PTCH2Q9Y6C5 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms