Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CLIC4Q9Y696 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CLIC4Q9Y696 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLIC4Q9Y696 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.02■□□□□ 0.64
CLIC4Q9Y696 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLIC4Q9Y696 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CLIC4Q9Y696 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
CLIC4Q9Y696 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC19.02■□□□□ 0.63
CLIC4Q9Y696 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CLIC4Q9Y696 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
CLIC4Q9Y696 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLIC4Q9Y696 SLC9A3P2-201ENST00000447821 2021 ntBASIC19.01■□□□□ 0.63
CLIC4Q9Y696 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC19.01■□□□□ 0.63
CLIC4Q9Y696 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLIC4Q9Y696 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLIC4Q9Y696 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLIC4Q9Y696 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC19.01■□□□□ 0.63
CLIC4Q9Y696 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLIC4Q9Y696 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC19.01■□□□□ 0.63
CLIC4Q9Y696 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLIC4Q9Y696 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC19.01■□□□□ 0.63
CLIC4Q9Y696 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLIC4Q9Y696 PAUPAR-201ENST00000630360 2965 ntBASIC19.01■□□□□ 0.63
CLIC4Q9Y696 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLIC4Q9Y696 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLIC4Q9Y696 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLIC4Q9Y696 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLIC4Q9Y696 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLIC4Q9Y696 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLIC4Q9Y696 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLIC4Q9Y696 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLIC4Q9Y696 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.01■□□□□ 0.63
CLIC4Q9Y696 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.01■□□□□ 0.63
CLIC4Q9Y696 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLIC4Q9Y696 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLIC4Q9Y696 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLIC4Q9Y696 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC19.01■□□□□ 0.63
CLIC4Q9Y696 AP002469.2-201ENST00000531724 424 ntBASIC19.01■□□□□ 0.63
CLIC4Q9Y696 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.01■□□□□ 0.63
CLIC4Q9Y696 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.01■□□□□ 0.63
CLIC4Q9Y696 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CLIC4Q9Y696 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLIC4Q9Y696 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
CLIC4Q9Y696 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLIC4Q9Y696 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
CLIC4Q9Y696 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CLIC4Q9Y696 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLIC4Q9Y696 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.01■□□□□ 0.63
CLIC4Q9Y696 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLIC4Q9Y696 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC19.01■□□□□ 0.63
CLIC4Q9Y696 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLIC4Q9Y696 REXO1L8P-201ENST00000604378 1897 ntBASIC19.01■□□□□ 0.63
CLIC4Q9Y696 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLIC4Q9Y696 AL365203.3-201ENST00000609742 2057 ntBASIC19.01■□□□□ 0.63
CLIC4Q9Y696 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLIC4Q9Y696 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLIC4Q9Y696 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CLIC4Q9Y696 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC19■□□□□ 0.63
CLIC4Q9Y696 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLIC4Q9Y696 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19■□□□□ 0.63
CLIC4Q9Y696 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CLIC4Q9Y696 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19■□□□□ 0.63
CLIC4Q9Y696 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLIC4Q9Y696 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLIC4Q9Y696 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CLIC4Q9Y696 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CLIC4Q9Y696 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLIC4Q9Y696 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLIC4Q9Y696 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC19■□□□□ 0.63
CLIC4Q9Y696 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19■□□□□ 0.63
CLIC4Q9Y696 HCG4-201ENST00000418983 998 ntBASIC19■□□□□ 0.63
CLIC4Q9Y696 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CLIC4Q9Y696 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CLIC4Q9Y696 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC19■□□□□ 0.63
CLIC4Q9Y696 AP001350.2-201ENST00000625104 1094 ntBASIC19■□□□□ 0.63
CLIC4Q9Y696 PGM5P2-202ENST00000637225 1043 ntBASIC19■□□□□ 0.63
CLIC4Q9Y696 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19■□□□□ 0.63
CLIC4Q9Y696 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLIC4Q9Y696 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
CLIC4Q9Y696 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC19■□□□□ 0.63
CLIC4Q9Y696 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC19■□□□□ 0.63
CLIC4Q9Y696 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC19■□□□□ 0.63
CLIC4Q9Y696 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLIC4Q9Y696 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC19■□□□□ 0.63
CLIC4Q9Y696 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC19■□□□□ 0.63
CLIC4Q9Y696 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC19■□□□□ 0.63
CLIC4Q9Y696 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLIC4Q9Y696 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC19■□□□□ 0.63
CLIC4Q9Y696 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
CLIC4Q9Y696 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLIC4Q9Y696 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC19■□□□□ 0.63
CLIC4Q9Y696 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC19■□□□□ 0.63
CLIC4Q9Y696 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLIC4Q9Y696 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLIC4Q9Y696 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19■□□□□ 0.63
CLIC4Q9Y696 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.99■□□□□ 0.63
CLIC4Q9Y696 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLIC4Q9Y696 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CLIC4Q9Y696 AC006449.6-201ENST00000612330 2296 ntBASIC18.99■□□□□ 0.63
CLIC4Q9Y696 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms