Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHGC4Q9Y5F7 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHGC4Q9Y5F7 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGC4Q9Y5F7 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
PCDHGC4Q9Y5F7 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHGC4Q9Y5F7 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHGC4Q9Y5F7 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGC4Q9Y5F7 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHGC4Q9Y5F7 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGC4Q9Y5F7 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGC4Q9Y5F7 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGC4Q9Y5F7 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
PCDHGC4Q9Y5F7 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGC4Q9Y5F7 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PCDHGC4Q9Y5F7 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDHGC4Q9Y5F7 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGC4Q9Y5F7 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
PCDHGC4Q9Y5F7 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGC4Q9Y5F7 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PCDHGC4Q9Y5F7 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGC4Q9Y5F7 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.79■□□□□ 0.28
PCDHGC4Q9Y5F7 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDHGC4Q9Y5F7 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDHGC4Q9Y5F7 CEND1P1-201ENST00000451006 455 ntBASIC16.79■□□□□ 0.28
PCDHGC4Q9Y5F7 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGC4Q9Y5F7 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.79■□□□□ 0.28
PCDHGC4Q9Y5F7 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGC4Q9Y5F7 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.79■□□□□ 0.28
PCDHGC4Q9Y5F7 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDHGC4Q9Y5F7 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.79■□□□□ 0.28
PCDHGC4Q9Y5F7 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
PCDHGC4Q9Y5F7 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDHGC4Q9Y5F7 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.79■□□□□ 0.28
PCDHGC4Q9Y5F7 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGC4Q9Y5F7 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDHGC4Q9Y5F7 AL161645.1-201ENST00000622716 1255 ntBASIC16.79■□□□□ 0.28
PCDHGC4Q9Y5F7 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDHGC4Q9Y5F7 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGC4Q9Y5F7 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PCDHGC4Q9Y5F7 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGC4Q9Y5F7 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDHGC4Q9Y5F7 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDHGC4Q9Y5F7 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDHGC4Q9Y5F7 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
PCDHGC4Q9Y5F7 GGT4P-201ENST00000623672 1708 ntBASIC16.79■□□□□ 0.28
PCDHGC4Q9Y5F7 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGC4Q9Y5F7 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGC4Q9Y5F7 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGC4Q9Y5F7 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGC4Q9Y5F7 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHGC4Q9Y5F7 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGC4Q9Y5F7 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGC4Q9Y5F7 ELL2P1-201ENST00000413990 1906 ntBASIC16.78■□□□□ 0.28
PCDHGC4Q9Y5F7 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PCDHGC4Q9Y5F7 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHGC4Q9Y5F7 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGC4Q9Y5F7 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGC4Q9Y5F7 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGC4Q9Y5F7 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGC4Q9Y5F7 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGC4Q9Y5F7 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PCDHGC4Q9Y5F7 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGC4Q9Y5F7 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGC4Q9Y5F7 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHGC4Q9Y5F7 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHGC4Q9Y5F7 AL671277.1-201ENST00000429656 993 ntBASIC16.78■□□□□ 0.28
PCDHGC4Q9Y5F7 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHGC4Q9Y5F7 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.78■□□□□ 0.28
PCDHGC4Q9Y5F7 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.78■□□□□ 0.28
PCDHGC4Q9Y5F7 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
PCDHGC4Q9Y5F7 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
PCDHGC4Q9Y5F7 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDHGC4Q9Y5F7 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
PCDHGC4Q9Y5F7 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGC4Q9Y5F7 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
PCDHGC4Q9Y5F7 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGC4Q9Y5F7 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGC4Q9Y5F7 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDHGC4Q9Y5F7 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGC4Q9Y5F7 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
PCDHGC4Q9Y5F7 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGC4Q9Y5F7 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGC4Q9Y5F7 AC016027.1-202ENST00000607927 1699 ntBASIC16.78■□□□□ 0.28
PCDHGC4Q9Y5F7 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGC4Q9Y5F7 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
PCDHGC4Q9Y5F7 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGC4Q9Y5F7 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGC4Q9Y5F7 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGC4Q9Y5F7 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHGC4Q9Y5F7 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHGC4Q9Y5F7 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
PCDHGC4Q9Y5F7 AC084018.2-201ENST00000613093 2607 ntBASIC16.77■□□□□ 0.28
PCDHGC4Q9Y5F7 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.77■□□□□ 0.28
PCDHGC4Q9Y5F7 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
PCDHGC4Q9Y5F7 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGC4Q9Y5F7 AL355306.1-201ENST00000415580 579 ntBASIC16.77■□□□□ 0.28
PCDHGC4Q9Y5F7 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHGC4Q9Y5F7 YBX1P5-201ENST00000509441 847 ntBASIC16.77■□□□□ 0.28
PCDHGC4Q9Y5F7 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.77■□□□□ 0.28
PCDHGC4Q9Y5F7 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms