Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBQLN1Q9UMX0 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.81■□□□□ 0.44
UBQLN1Q9UMX0 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
UBQLN1Q9UMX0 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBQLN1Q9UMX0 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.81■□□□□ 0.44
UBQLN1Q9UMX0 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
UBQLN1Q9UMX0 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBQLN1Q9UMX0 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBQLN1Q9UMX0 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.81■□□□□ 0.44
UBQLN1Q9UMX0 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.81■□□□□ 0.44
UBQLN1Q9UMX0 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.81■□□□□ 0.44
UBQLN1Q9UMX0 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.81■□□□□ 0.44
UBQLN1Q9UMX0 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.81■□□□□ 0.44
UBQLN1Q9UMX0 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.81■□□□□ 0.44
UBQLN1Q9UMX0 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.81■□□□□ 0.44
UBQLN1Q9UMX0 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBQLN1Q9UMX0 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
UBQLN1Q9UMX0 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.81■□□□□ 0.44
UBQLN1Q9UMX0 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBQLN1Q9UMX0 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBQLN1Q9UMX0 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBQLN1Q9UMX0 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.81■□□□□ 0.44
UBQLN1Q9UMX0 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
UBQLN1Q9UMX0 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
UBQLN1Q9UMX0 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBQLN1Q9UMX0 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.81■□□□□ 0.44
UBQLN1Q9UMX0 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.81■□□□□ 0.44
UBQLN1Q9UMX0 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
UBQLN1Q9UMX0 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
UBQLN1Q9UMX0 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.8■□□□□ 0.44
UBQLN1Q9UMX0 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBQLN1Q9UMX0 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.8■□□□□ 0.44
UBQLN1Q9UMX0 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBQLN1Q9UMX0 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
UBQLN1Q9UMX0 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBQLN1Q9UMX0 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
UBQLN1Q9UMX0 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBQLN1Q9UMX0 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
UBQLN1Q9UMX0 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
UBQLN1Q9UMX0 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.8■□□□□ 0.44
UBQLN1Q9UMX0 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
UBQLN1Q9UMX0 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.8■□□□□ 0.44
UBQLN1Q9UMX0 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
UBQLN1Q9UMX0 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.8■□□□□ 0.44
UBQLN1Q9UMX0 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.8■□□□□ 0.44
UBQLN1Q9UMX0 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
UBQLN1Q9UMX0 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.8■□□□□ 0.44
UBQLN1Q9UMX0 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
UBQLN1Q9UMX0 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
UBQLN1Q9UMX0 AC026150.2-201ENST00000564693 1156 ntBASIC17.8■□□□□ 0.44
UBQLN1Q9UMX0 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.8■□□□□ 0.44
UBQLN1Q9UMX0 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.8■□□□□ 0.44
UBQLN1Q9UMX0 AC015911.4-201ENST00000588022 1070 ntBASIC17.8■□□□□ 0.44
UBQLN1Q9UMX0 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBQLN1Q9UMX0 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBQLN1Q9UMX0 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.8■□□□□ 0.44
UBQLN1Q9UMX0 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
UBQLN1Q9UMX0 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
UBQLN1Q9UMX0 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBQLN1Q9UMX0 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBQLN1Q9UMX0 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
UBQLN1Q9UMX0 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.8■□□□□ 0.44
UBQLN1Q9UMX0 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.8■□□□□ 0.44
UBQLN1Q9UMX0 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
UBQLN1Q9UMX0 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBQLN1Q9UMX0 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
UBQLN1Q9UMX0 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
UBQLN1Q9UMX0 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBQLN1Q9UMX0 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.79■□□□□ 0.44
UBQLN1Q9UMX0 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.79■□□□□ 0.44
UBQLN1Q9UMX0 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
UBQLN1Q9UMX0 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBQLN1Q9UMX0 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBQLN1Q9UMX0 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBQLN1Q9UMX0 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
UBQLN1Q9UMX0 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBQLN1Q9UMX0 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.79■□□□□ 0.44
UBQLN1Q9UMX0 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBQLN1Q9UMX0 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
UBQLN1Q9UMX0 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
UBQLN1Q9UMX0 SPDYE14P-201ENST00000442619 822 ntBASIC17.79■□□□□ 0.44
UBQLN1Q9UMX0 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.79■□□□□ 0.44
UBQLN1Q9UMX0 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.79■□□□□ 0.44
UBQLN1Q9UMX0 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.79■□□□□ 0.44
UBQLN1Q9UMX0 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBQLN1Q9UMX0 ALG1L8P-201ENST00000533887 760 ntBASIC17.79■□□□□ 0.44
UBQLN1Q9UMX0 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.79■□□□□ 0.44
UBQLN1Q9UMX0 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.79■□□□□ 0.44
UBQLN1Q9UMX0 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBQLN1Q9UMX0 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.79■□□□□ 0.44
UBQLN1Q9UMX0 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.79■□□□□ 0.44
UBQLN1Q9UMX0 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
UBQLN1Q9UMX0 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
UBQLN1Q9UMX0 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBQLN1Q9UMX0 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBQLN1Q9UMX0 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
UBQLN1Q9UMX0 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBQLN1Q9UMX0 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBQLN1Q9UMX0 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBQLN1Q9UMX0 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms