Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLCF1Q9UBD9 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
CLCF1Q9UBD9 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLCF1Q9UBD9 CNN2P2-201ENST00000443536 909 ntBASIC14.79□□□□□ -0.04
CLCF1Q9UBD9 CNN2P3-201ENST00000450201 906 ntBASIC14.79□□□□□ -0.04
CLCF1Q9UBD9 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC14.79□□□□□ -0.04
CLCF1Q9UBD9 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLCF1Q9UBD9 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.79□□□□□ -0.04
CLCF1Q9UBD9 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.79□□□□□ -0.04
CLCF1Q9UBD9 AC067863.1-201ENST00000494933 530 ntBASIC14.79□□□□□ -0.04
CLCF1Q9UBD9 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLCF1Q9UBD9 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.79□□□□□ -0.04
CLCF1Q9UBD9 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLCF1Q9UBD9 AL138918.1-201ENST00000568306 659 ntBASIC14.79□□□□□ -0.04
CLCF1Q9UBD9 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.79□□□□□ -0.04
CLCF1Q9UBD9 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLCF1Q9UBD9 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLCF1Q9UBD9 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLCF1Q9UBD9 AC073389.1-201ENST00000595595 795 ntBASIC14.79□□□□□ -0.04
CLCF1Q9UBD9 AL136317.3-201ENST00000618497 906 ntBASIC14.79□□□□□ -0.04
CLCF1Q9UBD9 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CLCF1Q9UBD9 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLCF1Q9UBD9 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.79□□□□□ -0.04
CLCF1Q9UBD9 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLCF1Q9UBD9 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLCF1Q9UBD9 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLCF1Q9UBD9 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLCF1Q9UBD9 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLCF1Q9UBD9 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.79□□□□□ -0.04
CLCF1Q9UBD9 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLCF1Q9UBD9 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLCF1Q9UBD9 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLCF1Q9UBD9 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLCF1Q9UBD9 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CLCF1Q9UBD9 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.78□□□□□ -0.04
CLCF1Q9UBD9 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLCF1Q9UBD9 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CLCF1Q9UBD9 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CLCF1Q9UBD9 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLCF1Q9UBD9 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.78□□□□□ -0.04
CLCF1Q9UBD9 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLCF1Q9UBD9 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLCF1Q9UBD9 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC14.78□□□□□ -0.04
CLCF1Q9UBD9 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.78□□□□□ -0.04
CLCF1Q9UBD9 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLCF1Q9UBD9 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLCF1Q9UBD9 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLCF1Q9UBD9 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLCF1Q9UBD9 AC142381.1-201ENST00000426099 345 ntBASIC14.78□□□□□ -0.04
CLCF1Q9UBD9 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.78□□□□□ -0.04
CLCF1Q9UBD9 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.78□□□□□ -0.04
CLCF1Q9UBD9 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.78□□□□□ -0.04
CLCF1Q9UBD9 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.78□□□□□ -0.04
CLCF1Q9UBD9 AC105233.2-201ENST00000523697 349 ntBASIC14.78□□□□□ -0.04
CLCF1Q9UBD9 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.78□□□□□ -0.04
CLCF1Q9UBD9 AF228730.5-201ENST00000530288 346 ntBASIC14.78□□□□□ -0.04
CLCF1Q9UBD9 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.78□□□□□ -0.04
CLCF1Q9UBD9 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.78□□□□□ -0.04
CLCF1Q9UBD9 AC026150.2-201ENST00000564693 1156 ntBASIC14.78□□□□□ -0.04
CLCF1Q9UBD9 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.78□□□□□ -0.04
CLCF1Q9UBD9 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.78□□□□□ -0.04
CLCF1Q9UBD9 AC093512.1-201ENST00000617969 520 ntBASIC14.78□□□□□ -0.04
CLCF1Q9UBD9 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.78□□□□□ -0.04
CLCF1Q9UBD9 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLCF1Q9UBD9 CEP83-AS1-201ENST00000623122 2482 ntBASIC14.78□□□□□ -0.04
CLCF1Q9UBD9 AL645728.1-201ENST00000366221 2101 ntBASIC14.78□□□□□ -0.04
CLCF1Q9UBD9 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
CLCF1Q9UBD9 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLCF1Q9UBD9 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CLCF1Q9UBD9 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLCF1Q9UBD9 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLCF1Q9UBD9 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLCF1Q9UBD9 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLCF1Q9UBD9 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLCF1Q9UBD9 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLCF1Q9UBD9 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLCF1Q9UBD9 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CLCF1Q9UBD9 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.78□□□□□ -0.04
CLCF1Q9UBD9 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLCF1Q9UBD9 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLCF1Q9UBD9 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
CLCF1Q9UBD9 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLCF1Q9UBD9 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CLCF1Q9UBD9 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLCF1Q9UBD9 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CLCF1Q9UBD9 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLCF1Q9UBD9 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CLCF1Q9UBD9 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLCF1Q9UBD9 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CLCF1Q9UBD9 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLCF1Q9UBD9 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CLCF1Q9UBD9 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLCF1Q9UBD9 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.77□□□□□ -0.05
CLCF1Q9UBD9 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
CLCF1Q9UBD9 AC069262.1-201ENST00000539058 672 ntBASIC14.77□□□□□ -0.05
CLCF1Q9UBD9 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CLCF1Q9UBD9 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.77□□□□□ -0.05
CLCF1Q9UBD9 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.77□□□□□ -0.05
CLCF1Q9UBD9 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.77□□□□□ -0.05
CLCF1Q9UBD9 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms