Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.28■□□□□ 0.04
LRFN1Q9P244 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.28■□□□□ 0.04
LRFN1Q9P244 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.28■□□□□ 0.04
LRFN1Q9P244 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRFN1Q9P244 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.28■□□□□ 0.04
LRFN1Q9P244 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRFN1Q9P244 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRFN1Q9P244 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRFN1Q9P244 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRFN1Q9P244 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRFN1Q9P244 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRFN1Q9P244 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRFN1Q9P244 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.28■□□□□ 0.04
LRFN1Q9P244 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRFN1Q9P244 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRFN1Q9P244 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRFN1Q9P244 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.28■□□□□ 0.04
LRFN1Q9P244 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRFN1Q9P244 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRFN1Q9P244 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
LRFN1Q9P244 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
LRFN1Q9P244 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.28■□□□□ 0.04
LRFN1Q9P244 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRFN1Q9P244 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRFN1Q9P244 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRFN1Q9P244 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRFN1Q9P244 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
LRFN1Q9P244 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
LRFN1Q9P244 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LRFN1Q9P244 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.27■□□□□ 0.04
LRFN1Q9P244 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
LRFN1Q9P244 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
LRFN1Q9P244 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRFN1Q9P244 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LRFN1Q9P244 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.27■□□□□ 0.04
LRFN1Q9P244 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRFN1Q9P244 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRFN1Q9P244 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LRFN1Q9P244 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LRFN1Q9P244 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.27■□□□□ 0.04
LRFN1Q9P244 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
LRFN1Q9P244 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
LRFN1Q9P244 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.27■□□□□ 0.04
LRFN1Q9P244 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.27■□□□□ 0.04
LRFN1Q9P244 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.27■□□□□ 0.04
LRFN1Q9P244 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRFN1Q9P244 AC015911.4-201ENST00000588022 1070 ntBASIC15.27■□□□□ 0.04
LRFN1Q9P244 AC011467.4-201ENST00000594891 528 ntBASIC15.27■□□□□ 0.04
LRFN1Q9P244 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.27■□□□□ 0.04
LRFN1Q9P244 AC013467.2-201ENST00000605472 835 ntBASIC15.27■□□□□ 0.04
LRFN1Q9P244 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRFN1Q9P244 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRFN1Q9P244 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
LRFN1Q9P244 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRFN1Q9P244 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRFN1Q9P244 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRFN1Q9P244 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
LRFN1Q9P244 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRFN1Q9P244 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
LRFN1Q9P244 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRFN1Q9P244 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LRFN1Q9P244 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LRFN1Q9P244 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LRFN1Q9P244 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRFN1Q9P244 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRFN1Q9P244 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LRFN1Q9P244 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
LRFN1Q9P244 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LRFN1Q9P244 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.03
LRFN1Q9P244 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRFN1Q9P244 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.27■□□□□ 0.03
LRFN1Q9P244 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
LRFN1Q9P244 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
LRFN1Q9P244 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRFN1Q9P244 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
LRFN1Q9P244 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRFN1Q9P244 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRFN1Q9P244 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRFN1Q9P244 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.26■□□□□ 0.03
LRFN1Q9P244 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.26■□□□□ 0.03
LRFN1Q9P244 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRFN1Q9P244 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.26■□□□□ 0.03
LRFN1Q9P244 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRFN1Q9P244 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.26■□□□□ 0.03
LRFN1Q9P244 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRFN1Q9P244 AC139713.2-201ENST00000641328 2723 ntBASIC15.26■□□□□ 0.03
LRFN1Q9P244 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRFN1Q9P244 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRFN1Q9P244 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRFN1Q9P244 LINC00895-201ENST00000629028 1637 ntBASIC15.26■□□□□ 0.03
LRFN1Q9P244 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
LRFN1Q9P244 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRFN1Q9P244 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRFN1Q9P244 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRFN1Q9P244 GPS2P2-201ENST00000430745 888 ntBASIC15.26■□□□□ 0.03
LRFN1Q9P244 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.26■□□□□ 0.03
LRFN1Q9P244 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRFN1Q9P244 SLC25A39P2-201ENST00000537614 270 ntBASIC15.26■□□□□ 0.03
LRFN1Q9P244 AC069262.1-201ENST00000539058 672 ntBASIC15.26■□□□□ 0.03
LRFN1Q9P244 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms