Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 AL020989.1-201ENST00000422979 469 ntBASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 MTDHP3-201ENST00000594186 672 ntBASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 AC006538.1-201ENST00000567905 1585 ntBASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LIN7CQ9NUP9 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LIN7CQ9NUP9 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC13.9□□□□□ -0.18
LIN7CQ9NUP9 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
LIN7CQ9NUP9 SIGLEC16-201ENST00000599858 1437 ntBASIC13.9□□□□□ -0.18
LIN7CQ9NUP9 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC13.9□□□□□ -0.18
LIN7CQ9NUP9 AC079776.2-201ENST00000641154 1609 ntBASIC13.9□□□□□ -0.18
LIN7CQ9NUP9 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LIN7CQ9NUP9 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
LIN7CQ9NUP9 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LIN7CQ9NUP9 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LIN7CQ9NUP9 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LIN7CQ9NUP9 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LIN7CQ9NUP9 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC13.9□□□□□ -0.18
LIN7CQ9NUP9 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC13.9□□□□□ -0.18
LIN7CQ9NUP9 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC13.9□□□□□ -0.18
LIN7CQ9NUP9 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC13.9□□□□□ -0.18
LIN7CQ9NUP9 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LIN7CQ9NUP9 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LIN7CQ9NUP9 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LIN7CQ9NUP9 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LIN7CQ9NUP9 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LIN7CQ9NUP9 SPDYE21P-201ENST00000413323 827 ntBASIC13.9□□□□□ -0.18
LIN7CQ9NUP9 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC13.9□□□□□ -0.18
LIN7CQ9NUP9 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC13.9□□□□□ -0.18
LIN7CQ9NUP9 EMBP1-201ENST00000458200 901 ntBASIC13.9□□□□□ -0.18
LIN7CQ9NUP9 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LIN7CQ9NUP9 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC13.9□□□□□ -0.18
LIN7CQ9NUP9 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC13.9□□□□□ -0.18
LIN7CQ9NUP9 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC13.9□□□□□ -0.18
LIN7CQ9NUP9 AC073592.4-201ENST00000623827 446 ntBASIC13.9□□□□□ -0.18
LIN7CQ9NUP9 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.9□□□□□ -0.18
LIN7CQ9NUP9 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
LIN7CQ9NUP9 PAN3-AS1-201ENST00000563843 1351 ntBASIC13.9□□□□□ -0.18
LIN7CQ9NUP9 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LIN7CQ9NUP9 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LIN7CQ9NUP9 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LIN7CQ9NUP9 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC13.9□□□□□ -0.18
LIN7CQ9NUP9 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LIN7CQ9NUP9 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
LIN7CQ9NUP9 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
LIN7CQ9NUP9 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC13.9□□□□□ -0.18
LIN7CQ9NUP9 AC092364.2-201ENST00000596710 2692 ntBASIC13.9□□□□□ -0.18
LIN7CQ9NUP9 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC13.9□□□□□ -0.18
LIN7CQ9NUP9 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LIN7CQ9NUP9 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LIN7CQ9NUP9 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LIN7CQ9NUP9 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LIN7CQ9NUP9 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LIN7CQ9NUP9 MIR600HG-201ENST00000449175 5984 ntBASIC13.9□□□□□ -0.18
LIN7CQ9NUP9 AL356309.3-201ENST00000624132 1934 ntBASIC13.9□□□□□ -0.18
LIN7CQ9NUP9 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LIN7CQ9NUP9 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LIN7CQ9NUP9 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LIN7CQ9NUP9 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
LIN7CQ9NUP9 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC13.89□□□□□ -0.19
LIN7CQ9NUP9 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LIN7CQ9NUP9 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LIN7CQ9NUP9 FOS-208ENST00000555686 1496 ntTSL 2 BASIC13.89□□□□□ -0.19
LIN7CQ9NUP9 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC13.89□□□□□ -0.19
LIN7CQ9NUP9 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
LIN7CQ9NUP9 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
LIN7CQ9NUP9 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LIN7CQ9NUP9 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
LIN7CQ9NUP9 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LIN7CQ9NUP9 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LIN7CQ9NUP9 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC13.89□□□□□ -0.19
LIN7CQ9NUP9 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC13.89□□□□□ -0.19
LIN7CQ9NUP9 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LIN7CQ9NUP9 HIST2H3DP1-201ENST00000401004 416 ntBASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms