Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC8.45□□□□□ -1.06
CDC42SE1Q9NRR8 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 BEND3P3-201ENST00000611030 2440 ntBASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 GFER-205ENST00000569451 517 ntTSL 5 BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 AC092296.2-201ENST00000589470 999 ntBASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 AC008764.7-201ENST00000593779 1081 ntBASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 AC020658.6-201ENST00000623564 1870 ntBASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 BCORL1-201ENST00000218147 6860 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 AC133637.1-201ENST00000624115 1537 ntBASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 SMU1-201ENST00000397149 7122 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC8.44□□□□□ -1.06
CDC42SE1Q9NRR8 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 AC105206.1-202ENST00000314927 2368 ntBASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 FGD5P1-202ENST00000614866 2498 ntBASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 PXK-203ENST00000383715 1756 ntTSL 5 BASIC8.43□□□□□ -1.06
CDC42SE1Q9NRR8 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms