Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.61■□□□□ 0.41
CD248Q9HCU0 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CD248Q9HCU0 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CD248Q9HCU0 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.6■□□□□ 0.41
CD248Q9HCU0 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CD248Q9HCU0 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CD248Q9HCU0 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CD248Q9HCU0 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CD248Q9HCU0 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.6■□□□□ 0.41
CD248Q9HCU0 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.6■□□□□ 0.41
CD248Q9HCU0 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CD248Q9HCU0 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CD248Q9HCU0 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CD248Q9HCU0 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.6■□□□□ 0.41
CD248Q9HCU0 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CD248Q9HCU0 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CD248Q9HCU0 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.6■□□□□ 0.41
CD248Q9HCU0 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.6■□□□□ 0.41
CD248Q9HCU0 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CD248Q9HCU0 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.6■□□□□ 0.41
CD248Q9HCU0 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CD248Q9HCU0 AC002558.1-201ENST00000488906 803 ntBASIC17.6■□□□□ 0.41
CD248Q9HCU0 STK19B-204ENST00000512515 211 ntBASIC17.6■□□□□ 0.41
CD248Q9HCU0 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CD248Q9HCU0 AC018845.2-201ENST00000568326 409 ntBASIC17.6■□□□□ 0.41
CD248Q9HCU0 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
CD248Q9HCU0 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CD248Q9HCU0 AC116407.2-201ENST00000613639 860 ntBASIC17.6■□□□□ 0.41
CD248Q9HCU0 AL513190.1-201ENST00000621254 727 ntBASIC17.6■□□□□ 0.41
CD248Q9HCU0 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CD248Q9HCU0 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.6■□□□□ 0.41
CD248Q9HCU0 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CD248Q9HCU0 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CD248Q9HCU0 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CD248Q9HCU0 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.6■□□□□ 0.41
CD248Q9HCU0 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.6■□□□□ 0.41
CD248Q9HCU0 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CD248Q9HCU0 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CD248Q9HCU0 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CD248Q9HCU0 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
CD248Q9HCU0 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CD248Q9HCU0 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CD248Q9HCU0 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CD248Q9HCU0 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CD248Q9HCU0 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
CD248Q9HCU0 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CD248Q9HCU0 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CD248Q9HCU0 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CD248Q9HCU0 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.59■□□□□ 0.41
CD248Q9HCU0 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.59■□□□□ 0.41
CD248Q9HCU0 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.59■□□□□ 0.41
CD248Q9HCU0 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CD248Q9HCU0 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CD248Q9HCU0 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CD248Q9HCU0 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.59■□□□□ 0.41
CD248Q9HCU0 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.59■□□□□ 0.41
CD248Q9HCU0 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.59■□□□□ 0.41
CD248Q9HCU0 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.59■□□□□ 0.41
CD248Q9HCU0 AC079781.4-201ENST00000641908 219 ntBASIC17.59■□□□□ 0.41
CD248Q9HCU0 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CD248Q9HCU0 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CD248Q9HCU0 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CD248Q9HCU0 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CD248Q9HCU0 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CD248Q9HCU0 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.59■□□□□ 0.41
CD248Q9HCU0 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CD248Q9HCU0 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CD248Q9HCU0 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CD248Q9HCU0 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CD248Q9HCU0 AC024909.3-201ENST00000611513 2257 ntBASIC17.59■□□□□ 0.41
CD248Q9HCU0 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CD248Q9HCU0 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CD248Q9HCU0 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CD248Q9HCU0 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
CD248Q9HCU0 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
CD248Q9HCU0 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC17.58■□□□□ 0.41
CD248Q9HCU0 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CD248Q9HCU0 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CD248Q9HCU0 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CD248Q9HCU0 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CD248Q9HCU0 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.58■□□□□ 0.4
CD248Q9HCU0 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.58■□□□□ 0.4
CD248Q9HCU0 PTCHD3P3-201ENST00000403073 906 ntBASIC17.58■□□□□ 0.4
CD248Q9HCU0 AC211486.1-202ENST00000416371 468 ntBASIC17.58■□□□□ 0.4
CD248Q9HCU0 AC211476.1-201ENST00000503899 468 ntBASIC17.58■□□□□ 0.4
CD248Q9HCU0 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.58■□□□□ 0.4
CD248Q9HCU0 AC005829.1-201ENST00000570002 483 ntBASIC17.58■□□□□ 0.4
CD248Q9HCU0 MIR4751-201ENST00000578027 74 ntBASIC17.58■□□□□ 0.4
CD248Q9HCU0 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.58■□□□□ 0.4
CD248Q9HCU0 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.58■□□□□ 0.4
CD248Q9HCU0 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.58■□□□□ 0.4
CD248Q9HCU0 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CD248Q9HCU0 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CD248Q9HCU0 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
CD248Q9HCU0 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.58■□□□□ 0.4
CD248Q9HCU0 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CD248Q9HCU0 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.58■□□□□ 0.4
CD248Q9HCU0 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CD248Q9HCU0 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC17.58■□□□□ 0.4
CD248Q9HCU0 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms