Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC20.68■□□□□ 0.9
CNTNAP4Q9C0A0 AC092552.1-201ENST00000547243 906 ntBASIC20.68■□□□□ 0.9
CNTNAP4Q9C0A0 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CNTNAP4Q9C0A0 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC20.68■□□□□ 0.9
CNTNAP4Q9C0A0 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNTNAP4Q9C0A0 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CNTNAP4Q9C0A0 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNTNAP4Q9C0A0 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CNTNAP4Q9C0A0 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CNTNAP4Q9C0A0 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CNTNAP4Q9C0A0 AC067852.2-201ENST00000590513 2313 ntBASIC20.68■□□□□ 0.9
CNTNAP4Q9C0A0 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNTNAP4Q9C0A0 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNTNAP4Q9C0A0 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC20.67■□□□□ 0.9
CNTNAP4Q9C0A0 DEK-201ENST00000244776 1441 ntTSL 2 BASIC20.67■□□□□ 0.9
CNTNAP4Q9C0A0 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.67■□□□□ 0.9
CNTNAP4Q9C0A0 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.67■□□□□ 0.9
CNTNAP4Q9C0A0 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CNTNAP4Q9C0A0 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNTNAP4Q9C0A0 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.67■□□□□ 0.9
CNTNAP4Q9C0A0 FAM86MP-201ENST00000340703 885 ntBASIC20.67■□□□□ 0.9
CNTNAP4Q9C0A0 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNTNAP4Q9C0A0 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC20.67■□□□□ 0.9
CNTNAP4Q9C0A0 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNTNAP4Q9C0A0 BNIP3P42-201ENST00000454982 569 ntBASIC20.67■□□□□ 0.9
CNTNAP4Q9C0A0 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC20.67■□□□□ 0.9
CNTNAP4Q9C0A0 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC20.67■□□□□ 0.9
CNTNAP4Q9C0A0 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CNTNAP4Q9C0A0 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC20.67■□□□□ 0.9
CNTNAP4Q9C0A0 AC010319.3-201ENST00000597028 470 ntBASIC20.67■□□□□ 0.9
CNTNAP4Q9C0A0 BNIP3P29-201ENST00000598302 571 ntBASIC20.67■□□□□ 0.9
CNTNAP4Q9C0A0 AC011447.5-201ENST00000616168 564 ntBASIC20.67■□□□□ 0.9
CNTNAP4Q9C0A0 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC20.67■□□□□ 0.9
CNTNAP4Q9C0A0 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC20.67■□□□□ 0.9
CNTNAP4Q9C0A0 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC20.67■□□□□ 0.9
CNTNAP4Q9C0A0 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNTNAP4Q9C0A0 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNTNAP4Q9C0A0 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CNTNAP4Q9C0A0 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNTNAP4Q9C0A0 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNTNAP4Q9C0A0 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNTNAP4Q9C0A0 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CNTNAP4Q9C0A0 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC20.66■□□□□ 0.9
CNTNAP4Q9C0A0 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNTNAP4Q9C0A0 CLK3P2-201ENST00000427566 1453 ntBASIC20.66■□□□□ 0.9
CNTNAP4Q9C0A0 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC20.66■□□□□ 0.9
CNTNAP4Q9C0A0 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC20.66■□□□□ 0.9
CNTNAP4Q9C0A0 RPF1-202ENST00000370656 724 ntTSL 2 BASIC20.66■□□□□ 0.9
CNTNAP4Q9C0A0 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC20.66■□□□□ 0.9
CNTNAP4Q9C0A0 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC20.66■□□□□ 0.9
CNTNAP4Q9C0A0 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CNTNAP4Q9C0A0 AC104989.1-201ENST00000519711 778 ntBASIC20.66■□□□□ 0.9
CNTNAP4Q9C0A0 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNTNAP4Q9C0A0 PAM16-204ENST00000571941 674 ntTSL 3 BASIC20.66■□□□□ 0.9
CNTNAP4Q9C0A0 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC20.66■□□□□ 0.9
CNTNAP4Q9C0A0 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC20.66■□□□□ 0.9
CNTNAP4Q9C0A0 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC20.66■□□□□ 0.9
CNTNAP4Q9C0A0 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC20.66■□□□□ 0.9
CNTNAP4Q9C0A0 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC20.66■□□□□ 0.9
CNTNAP4Q9C0A0 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNTNAP4Q9C0A0 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNTNAP4Q9C0A0 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
CNTNAP4Q9C0A0 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNTNAP4Q9C0A0 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CNTNAP4Q9C0A0 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNTNAP4Q9C0A0 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CNTNAP4Q9C0A0 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNTNAP4Q9C0A0 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.65■□□□□ 0.9
CNTNAP4Q9C0A0 AL645728.1-201ENST00000366221 2101 ntBASIC20.65■□□□□ 0.9
CNTNAP4Q9C0A0 CYP4F24P-201ENST00000586049 1580 ntBASIC20.65■□□□□ 0.9
CNTNAP4Q9C0A0 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.65■□□□□ 0.9
CNTNAP4Q9C0A0 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
CNTNAP4Q9C0A0 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNTNAP4Q9C0A0 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC20.65■□□□□ 0.9
CNTNAP4Q9C0A0 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC20.65■□□□□ 0.9
CNTNAP4Q9C0A0 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CNTNAP4Q9C0A0 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC20.65■□□□□ 0.9
CNTNAP4Q9C0A0 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CNTNAP4Q9C0A0 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC20.65■□□□□ 0.9
CNTNAP4Q9C0A0 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CNTNAP4Q9C0A0 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
CNTNAP4Q9C0A0 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNTNAP4Q9C0A0 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CNTNAP4Q9C0A0 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNTNAP4Q9C0A0 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNTNAP4Q9C0A0 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CNTNAP4Q9C0A0 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNTNAP4Q9C0A0 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC20.65■□□□□ 0.9
CNTNAP4Q9C0A0 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CNTNAP4Q9C0A0 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC20.65■□□□□ 0.9
CNTNAP4Q9C0A0 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CNTNAP4Q9C0A0 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNTNAP4Q9C0A0 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
CNTNAP4Q9C0A0 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CNTNAP4Q9C0A0 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CNTNAP4Q9C0A0 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CNTNAP4Q9C0A0 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CNTNAP4Q9C0A0 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.64■□□□□ 0.9
CNTNAP4Q9C0A0 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNTNAP4Q9C0A0 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms