Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 AC099063.4-201ENST00000641099 1602 ntBASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 Y_RNA.295-201ENST00000364918 102 ntBASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 Y_RNA.359-201ENST00000365498 102 ntBASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 RNU6-332P-201ENST00000391193 108 ntBASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 AL356057.1-202ENST00000402263 756 ntBASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 OR8F1P-201ENST00000425243 930 ntBASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 HSPD1P12-201ENST00000429127 1069 ntBASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 AC002480.1-201ENST00000442252 1282 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 RPL9P6-201ENST00000492764 598 ntBASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 NREP-219ENST00000509979 771 ntTSL 4 BASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 AC026801.2-201ENST00000515352 425 ntBASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 AL133304.1-201ENST00000548199 549 ntTSL 4 BASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 AC023906.5-201ENST00000558607 635 ntTSL 2 BASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 AL391840.1-201ENST00000571144 367 ntBASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 AC125437.1-201ENST00000586389 714 ntBASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 FXYD3-212ENST00000605550 590 ntTSL 4 BASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 AL021707.7-201ENST00000607991 416 ntBASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 TRAC-201ENST00000611116 976 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 AC010538.1-201ENST00000615131 663 ntBASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 AL031658.2-201ENST00000616850 651 ntBASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 AC106872.5-201ENST00000508856 1416 ntBASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 CASC19-206ENST00000641028 1430 ntBASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC10.55□□□□□ -0.72
KRTAP3-3Q9BYR6 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC10.54□□□□□ -0.72
KRTAP3-3Q9BYR6 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
KRTAP3-3Q9BYR6 BET1-201ENST00000222547 1504 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
KRTAP3-3Q9BYR6 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
KRTAP3-3Q9BYR6 GTSE1-AS1-202ENST00000623117 1518 ntBASIC10.54□□□□□ -0.72
KRTAP3-3Q9BYR6 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
KRTAP3-3Q9BYR6 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
KRTAP3-3Q9BYR6 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
KRTAP3-3Q9BYR6 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
KRTAP3-3Q9BYR6 ARPC5-203ENST00000367534 622 ntTSL 3 BASIC10.54□□□□□ -0.72
KRTAP3-3Q9BYR6 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
KRTAP3-3Q9BYR6 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC10.54□□□□□ -0.72
KRTAP3-3Q9BYR6 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
KRTAP3-3Q9BYR6 CD72-202ENST00000378430 585 ntTSL 3 BASIC10.54□□□□□ -0.72
KRTAP3-3Q9BYR6 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
KRTAP3-3Q9BYR6 RNU6-463P-201ENST00000384340 107 ntBASIC10.54□□□□□ -0.72
KRTAP3-3Q9BYR6 RNU6-738P-201ENST00000384531 106 ntBASIC10.54□□□□□ -0.72
KRTAP3-3Q9BYR6 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC10.54□□□□□ -0.72
KRTAP3-3Q9BYR6 RPL5P8-201ENST00000396820 815 ntBASIC10.54□□□□□ -0.72
KRTAP3-3Q9BYR6 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
KRTAP3-3Q9BYR6 FTH1P26-201ENST00000406512 701 ntBASIC10.54□□□□□ -0.72
KRTAP3-3Q9BYR6 MTCO3P12-201ENST00000416718 547 ntBASIC10.54□□□□□ -0.72
KRTAP3-3Q9BYR6 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC10.54□□□□□ -0.72
KRTAP3-3Q9BYR6 HNRNPA1P25-201ENST00000422644 937 ntBASIC10.54□□□□□ -0.72
KRTAP3-3Q9BYR6 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC10.54□□□□□ -0.72
KRTAP3-3Q9BYR6 AC104651.1-201ENST00000427559 735 ntBASIC10.54□□□□□ -0.72
KRTAP3-3Q9BYR6 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC10.54□□□□□ -0.72
KRTAP3-3Q9BYR6 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
KRTAP3-3Q9BYR6 MIR4435-2HG-212ENST00000444301 666 ntTSL 3 BASIC10.54□□□□□ -0.72
KRTAP3-3Q9BYR6 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC10.54□□□□□ -0.72
KRTAP3-3Q9BYR6 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC10.54□□□□□ -0.72
KRTAP3-3Q9BYR6 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC10.54□□□□□ -0.72
KRTAP3-3Q9BYR6 OR6K1P-201ENST00000456766 971 ntBASIC10.54□□□□□ -0.72
KRTAP3-3Q9BYR6 ARHGAP31-AS1-201ENST00000466292 624 ntTSL 4 BASIC10.54□□□□□ -0.72
KRTAP3-3Q9BYR6 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC10.54□□□□□ -0.72
KRTAP3-3Q9BYR6 C2orf74-205ENST00000488469 1070 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
KRTAP3-3Q9BYR6 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms