Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RPAP1Q9BWH6 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
RPAP1Q9BWH6 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RPAP1Q9BWH6 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
RPAP1Q9BWH6 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.16■□□□□ 0.82
RPAP1Q9BWH6 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RPAP1Q9BWH6 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
RPAP1Q9BWH6 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
RPAP1Q9BWH6 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RPAP1Q9BWH6 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RPAP1Q9BWH6 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
RPAP1Q9BWH6 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
RPAP1Q9BWH6 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RPAP1Q9BWH6 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
RPAP1Q9BWH6 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RPAP1Q9BWH6 PTMS-202ENST00000389462 773 ntTSL 2 BASIC20.16■□□□□ 0.82
RPAP1Q9BWH6 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
RPAP1Q9BWH6 AP002490.2-201ENST00000524791 560 ntBASIC20.16■□□□□ 0.82
RPAP1Q9BWH6 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC20.16■□□□□ 0.82
RPAP1Q9BWH6 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC20.16■□□□□ 0.82
RPAP1Q9BWH6 AC084121.4-201ENST00000641598 221 ntBASIC20.16■□□□□ 0.82
RPAP1Q9BWH6 AF228730.8-201ENST00000642140 221 ntBASIC20.16■□□□□ 0.82
RPAP1Q9BWH6 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RPAP1Q9BWH6 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
RPAP1Q9BWH6 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC20.16■□□□□ 0.82
RPAP1Q9BWH6 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
RPAP1Q9BWH6 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC20.16■□□□□ 0.82
RPAP1Q9BWH6 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC20.16■□□□□ 0.82
RPAP1Q9BWH6 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RPAP1Q9BWH6 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
RPAP1Q9BWH6 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
RPAP1Q9BWH6 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RPAP1Q9BWH6 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RPAP1Q9BWH6 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RPAP1Q9BWH6 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC20.16■□□□□ 0.82
RPAP1Q9BWH6 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RPAP1Q9BWH6 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
RPAP1Q9BWH6 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RPAP1Q9BWH6 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RPAP1Q9BWH6 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
RPAP1Q9BWH6 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
RPAP1Q9BWH6 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RPAP1Q9BWH6 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RPAP1Q9BWH6 DOC2GP-204ENST00000639052 2548 ntBASIC20.15■□□□□ 0.82
RPAP1Q9BWH6 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
RPAP1Q9BWH6 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
RPAP1Q9BWH6 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RPAP1Q9BWH6 SLC22A20-204ENST00000530038 1673 ntBASIC20.15■□□□□ 0.82
RPAP1Q9BWH6 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RPAP1Q9BWH6 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RPAP1Q9BWH6 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RPAP1Q9BWH6 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC20.15■□□□□ 0.82
RPAP1Q9BWH6 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RPAP1Q9BWH6 RPL30-202ENST00000396070 440 ntTSL 2 BASIC20.15■□□□□ 0.82
RPAP1Q9BWH6 PMS2P4-201ENST00000412466 1052 ntBASIC20.15■□□□□ 0.82
RPAP1Q9BWH6 FAM58DP-201ENST00000428076 619 ntBASIC20.15■□□□□ 0.82
RPAP1Q9BWH6 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC20.15■□□□□ 0.82
RPAP1Q9BWH6 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC20.15■□□□□ 0.82
RPAP1Q9BWH6 COX20P2-201ENST00000452636 358 ntBASIC20.15■□□□□ 0.82
RPAP1Q9BWH6 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC20.15■□□□□ 0.82
RPAP1Q9BWH6 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC20.15■□□□□ 0.82
RPAP1Q9BWH6 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC20.15■□□□□ 0.82
RPAP1Q9BWH6 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RPAP1Q9BWH6 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RPAP1Q9BWH6 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC20.15■□□□□ 0.82
RPAP1Q9BWH6 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RPAP1Q9BWH6 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RPAP1Q9BWH6 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
RPAP1Q9BWH6 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
RPAP1Q9BWH6 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC20.15■□□□□ 0.82
RPAP1Q9BWH6 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
RPAP1Q9BWH6 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
RPAP1Q9BWH6 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
RPAP1Q9BWH6 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RPAP1Q9BWH6 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RPAP1Q9BWH6 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RPAP1Q9BWH6 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RPAP1Q9BWH6 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
RPAP1Q9BWH6 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC20.14■□□□□ 0.81
RPAP1Q9BWH6 SPCS2P4-201ENST00000436160 681 ntBASIC20.14■□□□□ 0.81
RPAP1Q9BWH6 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
RPAP1Q9BWH6 CFL1-212ENST00000531413 636 ntTSL 3 BASIC20.14■□□□□ 0.81
RPAP1Q9BWH6 AC087641.1-201ENST00000557561 1021 ntBASIC20.14■□□□□ 0.81
RPAP1Q9BWH6 DUT-210ENST00000559935 569 ntTSL 3 BASIC20.14■□□□□ 0.81
RPAP1Q9BWH6 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC20.14■□□□□ 0.81
RPAP1Q9BWH6 MIR3909-201ENST00000579518 119 ntBASIC20.14■□□□□ 0.81
RPAP1Q9BWH6 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC20.14■□□□□ 0.81
RPAP1Q9BWH6 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC20.14■□□□□ 0.81
RPAP1Q9BWH6 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
RPAP1Q9BWH6 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RPAP1Q9BWH6 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RPAP1Q9BWH6 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
RPAP1Q9BWH6 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RPAP1Q9BWH6 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RPAP1Q9BWH6 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RPAP1Q9BWH6 WT1-209ENST00000530998 2421 ntTSL 2 BASIC20.14■□□□□ 0.81
RPAP1Q9BWH6 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RPAP1Q9BWH6 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RPAP1Q9BWH6 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RPAP1Q9BWH6 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms