Protein–RNA interactions for Protein: Q99879

HIST1H2BM, Histone H2B type 1-M, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BMQ99879 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HIST1H2BMQ99879 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HIST1H2BMQ99879 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HIST1H2BMQ99879 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HIST1H2BMQ99879 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
HIST1H2BMQ99879 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
HIST1H2BMQ99879 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC12.55□□□□□ -0.4
HIST1H2BMQ99879 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC12.55□□□□□ -0.4
HIST1H2BMQ99879 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC12.55□□□□□ -0.4
HIST1H2BMQ99879 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC12.55□□□□□ -0.4
HIST1H2BMQ99879 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC12.55□□□□□ -0.4
HIST1H2BMQ99879 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC12.55□□□□□ -0.4
HIST1H2BMQ99879 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC12.55□□□□□ -0.4
HIST1H2BMQ99879 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
HIST1H2BMQ99879 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC12.55□□□□□ -0.4
HIST1H2BMQ99879 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HIST1H2BMQ99879 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
HIST1H2BMQ99879 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC12.55□□□□□ -0.4
HIST1H2BMQ99879 AJ011931.1-201ENST00000618749 2492 ntBASIC12.55□□□□□ -0.4
HIST1H2BMQ99879 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
HIST1H2BMQ99879 HARS-203ENST00000431330 1774 ntTSL 2 BASIC12.55□□□□□ -0.4
HIST1H2BMQ99879 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HIST1H2BMQ99879 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
HIST1H2BMQ99879 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HIST1H2BMQ99879 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HIST1H2BMQ99879 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HIST1H2BMQ99879 MROH4P-201ENST00000431302 1578 ntBASIC12.55□□□□□ -0.4
HIST1H2BMQ99879 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HIST1H2BMQ99879 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
HIST1H2BMQ99879 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HIST1H2BMQ99879 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
HIST1H2BMQ99879 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HIST1H2BMQ99879 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HIST1H2BMQ99879 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
HIST1H2BMQ99879 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 AC126335.2-201ENST00000623362 4637 ntBASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 AC148477.4-201ENST00000613430 1793 ntBASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 AC005562.1-201ENST00000583030 3219 ntBASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 ABHD17AP6-201ENST00000458502 1044 ntBASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 ISCU-212ENST00000547005 795 ntTSL 3 BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 MIR3180-5-201ENST00000583743 153 ntBASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 GGT3P-204ENST00000453783 1664 ntBASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 KCP-203ENST00000610776 5108 ntTSL 5 BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H2BMQ99879 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms