Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CPNE1Q99829 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPNE1Q99829 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CPNE1Q99829 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.69■□□□□ 0.26
CPNE1Q99829 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.68■□□□□ 0.26
CPNE1Q99829 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.68■□□□□ 0.26
CPNE1Q99829 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CPNE1Q99829 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CPNE1Q99829 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CPNE1Q99829 LINC01144-201ENST00000626198 1710 ntBASIC16.68■□□□□ 0.26
CPNE1Q99829 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.68■□□□□ 0.26
CPNE1Q99829 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CPNE1Q99829 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CPNE1Q99829 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CPNE1Q99829 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CPNE1Q99829 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CPNE1Q99829 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CPNE1Q99829 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.68■□□□□ 0.26
CPNE1Q99829 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.68■□□□□ 0.26
CPNE1Q99829 UPK3BP1-201ENST00000428678 509 ntBASIC16.68■□□□□ 0.26
CPNE1Q99829 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CPNE1Q99829 HCG4P8-203ENST00000443049 980 ntBASIC16.68■□□□□ 0.26
CPNE1Q99829 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
CPNE1Q99829 POU5F1P6-201ENST00000466990 990 ntBASIC16.68■□□□□ 0.26
CPNE1Q99829 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CPNE1Q99829 AC107918.2-201ENST00000530817 355 ntBASIC16.68■□□□□ 0.26
CPNE1Q99829 AC091304.2-201ENST00000564639 760 ntBASIC16.68■□□□□ 0.26
CPNE1Q99829 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.68■□□□□ 0.26
CPNE1Q99829 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.68■□□□□ 0.26
CPNE1Q99829 AC025062.2-201ENST00000605477 670 ntBASIC16.68■□□□□ 0.26
CPNE1Q99829 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.68■□□□□ 0.26
CPNE1Q99829 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CPNE1Q99829 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CPNE1Q99829 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CPNE1Q99829 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CPNE1Q99829 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CPNE1Q99829 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CPNE1Q99829 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.68■□□□□ 0.26
CPNE1Q99829 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CPNE1Q99829 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CPNE1Q99829 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.68■□□□□ 0.26
CPNE1Q99829 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.68■□□□□ 0.26
CPNE1Q99829 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE1Q99829 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CPNE1Q99829 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.67■□□□□ 0.26
CPNE1Q99829 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE1Q99829 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE1Q99829 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.67■□□□□ 0.26
CPNE1Q99829 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE1Q99829 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE1Q99829 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE1Q99829 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE1Q99829 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.67■□□□□ 0.26
CPNE1Q99829 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE1Q99829 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE1Q99829 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE1Q99829 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CPNE1Q99829 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.67■□□□□ 0.26
CPNE1Q99829 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.67■□□□□ 0.26
CPNE1Q99829 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.67■□□□□ 0.26
CPNE1Q99829 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE1Q99829 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE1Q99829 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.67■□□□□ 0.26
CPNE1Q99829 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.67■□□□□ 0.26
CPNE1Q99829 AC021087.4-201ENST00000563761 564 ntBASIC16.67■□□□□ 0.26
CPNE1Q99829 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.67■□□□□ 0.26
CPNE1Q99829 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.67■□□□□ 0.26
CPNE1Q99829 AP001350.2-201ENST00000625104 1094 ntBASIC16.67■□□□□ 0.26
CPNE1Q99829 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE1Q99829 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE1Q99829 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE1Q99829 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE1Q99829 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE1Q99829 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE1Q99829 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE1Q99829 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CPNE1Q99829 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE1Q99829 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE1Q99829 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE1Q99829 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE1Q99829 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE1Q99829 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.66■□□□□ 0.26
CPNE1Q99829 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE1Q99829 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.66■□□□□ 0.26
CPNE1Q99829 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.66■□□□□ 0.26
CPNE1Q99829 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.66■□□□□ 0.26
CPNE1Q99829 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.66■□□□□ 0.26
CPNE1Q99829 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.66■□□□□ 0.26
CPNE1Q99829 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CPNE1Q99829 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.66■□□□□ 0.26
CPNE1Q99829 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE1Q99829 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.66■□□□□ 0.26
CPNE1Q99829 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE1Q99829 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE1Q99829 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE1Q99829 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPNE1Q99829 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.66■□□□□ 0.26
CPNE1Q99829 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.66■□□□□ 0.26
CPNE1Q99829 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.66■□□□□ 0.26
CPNE1Q99829 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms